RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 SERPINB12Q96P63 405 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 DEPDC7Q96QD5 511 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 GFM1Q96RP9 751 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 SLC38A3Q99624 504 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 CCDC68Q9H2F9 335 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 PPANQ9NQ55 473 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 PRDM8Q9NQV8 689 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 IMP3Q9NV31 184 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 KCNK4Q9NYG8 393 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 TBC1D29Q9UFV1 150 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 CDC23Q9UJX2 597 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 TMPRSS11EQ9UL52 423 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 RIMKLBQ9ULI2 386 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 SOX13Q9UN79 622 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 PSMD13Q9UNM6 376 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 CLCA2Q9UQC9 943 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 RPS6KL1Q9Y6S9 549 aa7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 ASCC3Q8N3C0 2202 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 ZFHX2Q9C0A1 2572 aaPredicted RBP7.1□□□□□ -1.27
NPLOC4-221ENST00000625705 PLXNB3Q9ULL4 1909 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 PTPRZ1P23471 2315 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 KIR2DS5A0A0G2JLQ3 304 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 A0A0G2JNG1 304 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 MAGEB16A2A368 324 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CTAGE15A4D2H0 777 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 FAM149AA5PLN7 773 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 KLHL33A6NCF5 533 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 MGAT4DA6NG13 374 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 OR5K4A6NMS3 321 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 KIR2DS3K7RE56 304 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 IFRD1O00458 451 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CD3EAPO15446 510 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 RAD51CO43502 376 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 NUDT21O43809 227 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 NOBOXO60393 691 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 KCNJ13O60928 360 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CTAGE8P0CG41 777 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 PRSS56P0CW18 603 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 ITGB6P18564 788 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 PGAM1P18669 254 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 FOXN2P32314 431 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 PRLHRP49683 370 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CLCNKAP51800 687 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 ITGA8P53708 1063 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 EIF3BP55884 814 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CLDN6P56747 220 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 MRPS25P82663 173 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 MSLNQ13421 630 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 TUBB2AQ13885 445 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 NFE2L1Q14494 772 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 HLTFQ14527 1009 aaKnown RBP eCLIP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 ITIH4Q14624 930 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 KIR2DS5Q14953 304 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 BRD3Q15059 726 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 BCL7AQ4VC05 210 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 HP1BP3Q5SSJ5 553 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 PERM1Q5SV97 790 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 RNF187Q5TA31 235 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 ARMC3Q5W041 872 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 RBM44Q6ZP01 1051 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 ZNF534Q76KX8 674 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 RAB44Q7Z6P3 723 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 LDB1Q86U70 411 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CTAGE6Q86UF2 777 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 TMPRSS12Q86WS5 348 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 ZNF761Q86XN6 746 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 NRROSQ86YC3 692 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 SFTPA2Q8IWL1 248 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CTAGE4Q8IX94 777 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CFAP206Q8IYR0 622 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 NAGSQ8N159 534 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 MPP5Q8N3R9 675 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 ARL14Q8N4G2 192 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CLDN19Q8N6F1 224 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 GPR156Q8NFN8 814 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 OR13J1Q8NGT2 312 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 OR10G6Q8NH81 332 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 WDR48Q8TAF3 677 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 HM13Q8TCT9 377 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CALML6Q8TD86 181 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 SKA2Q8WVK7 121 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 ELMO1Q92556 727 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 MFSD3Q96ES6 412 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 TUBB2BQ9BVA1 445 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 KIFC1Q9BW19 673 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 SCNM1Q9BWG6 230 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 MRM3Q9HC36 420 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 NEUROD4Q9HD90 331 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 C20orf96Q9NUD7 363 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 GNPTGQ9UJJ9 305 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 KLK13Q9UKR3 277 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 CHMP2BQ9UQN3 213 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 SNX24Q9Y343 169 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 NEU2Q9Y3R4 380 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 PCYT1BQ9Y5K3 369 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 RNF215Q9Y6U7 377 aa7.09□□□□□ -1.27
NPLOC4-221ENST00000625705 ZFC3H1O60293 1989 aaKnown RBP7.08□□□□□ -1.28
NPLOC4-221ENST00000625705 TRBV5-4A0A0C4DH59 114 aa7.08□□□□□ -1.28
NPLOC4-221ENST00000625705 LY6G6EA0A0G2JKS1 128 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms