RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 UBP1Q9NZI7 540 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 CHMP5Q9NZZ3 219 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 C5AR2Q9P296 337 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 BTRCQ9Y297 605 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 MDC1Q14676 2089 aaKnown RBP14.3□□□□□ -0.12
PNKP-218ENST00000625299 GSAPA4D1B5 854 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 LDB2O43679 373 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 UGT1A9O60656 530 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 PMPCBO75439 489 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 NDST3O95803 873 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 ALPPP05187 535 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 CAPN1P07384 714 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 UGT1A6P19224 532 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 UGT1A1P22309 533 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 UGT1A4P22310 534 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 AKT1P31749 480 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 PREPP48147 710 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 PRKAA1Q13131 559 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 KRT33BQ14525 404 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 NOMO1Q15155 1222 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 FNBP1LQ5T0N5 605 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 B4GALNT4Q76KP1 1039 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 MRGPREQ86SM8 312 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 CLEC1AQ8NC01 280 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 OR4E2Q8NGC2 313 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 FAF2Q96CS3 445 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 MOCOSQ96EN8 888 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 SLC25A51Q9H1U9 297 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 UGT1A7Q9HAW7 530 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 UGT1A10Q9HAW8 530 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 UGT1A8Q9HAW9 530 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 SLC24A2Q9UI40 661 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
PNKP-218ENST00000625299 CYP1A2P05177 515 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 SLC35G4P0C7Q5 338 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 PRF1P14222 555 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 CA5AP35218 305 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 SPAM1P38567 509 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 LMAN1P49257 510 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 TAS2R40P59535 323 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 GSE1Q14687 1217 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 LLGL1Q15334 1064 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 NFKBIBQ15653 356 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 LDLRAP1Q5SW96 308 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 RBM43Q6ZSC3 357 aaKnown RBP14.28□□□□□ -0.12
PNKP-218ENST00000625299 SLC34A3Q8N130 599 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 CARFQ8N187 725 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 SPDYE1Q8NFV5 336 aaPredicted RBP14.28□□□□□ -0.12
PNKP-218ENST00000625299 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.28□□□□□ -0.12
PNKP-218ENST00000625299 NAT14Q8WUY8 206 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 INPP5DQ92835 1189 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 KLHL25Q9H0H3 589 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 KIR3DX1Q9H7L2 352 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 IL26Q9NPH9 171 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 CCDC88CQ9P219 2028 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 NTNG1Q9Y2I2 539 aa14.28□□□□□ -0.12
PNKP-218ENST00000625299 SEC16AO15027 2179 aa14.27□□□□□ -0.12
PNKP-218ENST00000625299 GLYATL1P3A0A0U1RQE8 302 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 E7EQ34 232 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 MASP2O00187 686 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 PEX12O00623 359 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 HNRNPRO43390 633 aaKnown RBP14.27□□□□□ -0.13
PNKP-218ENST00000625299 BUD23O43709 281 aaKnown RBP14.27□□□□□ -0.13
PNKP-218ENST00000625299 AGXTP21549 392 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 HMGCLP35914 325 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 ADCY2Q08462 1091 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 MYBPC3Q14896 1274 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 FILIP1LQ4L180 1135 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 ZNF789Q5FWF6 425 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 GPRC6AQ5T6X5 926 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 MLIPQ5VWP3 458 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 METRNLQ641Q3 311 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 GALNT16Q8N428 558 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 ZADH2Q8N4Q0 377 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 DDHD1Q8NEL9 900 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 UBE2Q2Q8WVN8 375 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 TM9SF4Q92544 642 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 RAPGEF5Q92565 580 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 FER1L6-AS2Q96M78 137 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 SRPK1Q96SB4 655 aaKnown RBP14.27□□□□□ -0.13
PNKP-218ENST00000625299 UNKQ9C0B0 810 aaKnown RBP14.27□□□□□ -0.13
PNKP-218ENST00000625299 XPO4Q9C0E2 1151 aaKnown RBP14.27□□□□□ -0.13
PNKP-218ENST00000625299 AGPAT4Q9NRZ5 378 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 POMT2Q9UKY4 750 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 C2CD3Q4AC94 2353 aa14.27□□□□□ -0.13
PNKP-218ENST00000625299 LRRTM2O43300 516 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 MAP3K7O43318 606 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 ZNF749O43361 778 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 POLBP06746 335 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 ST6GAL1P15907 406 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 MSH3P20585 1137 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 KDELR1P24390 212 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 PER3P56645 1201 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 LONRF2Q1L5Z9 754 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 DCAF10Q5QP82 559 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 C1orf189Q5VU69 101 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 NPNTQ6UXI9 565 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 GLT6D1Q7Z4J2 308 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 CUZD1Q86UP6 607 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 SLC25A41Q8N5S1 370 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms