RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 CKMP06732 381 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 ENO2P09104 434 aaPredicted RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 CNPP09543 421 aaKnown RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 UMPSP11172 480 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 FCGR1AP12314 374 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 ATP6V1B1P15313 513 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 LAG3P18627 525 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 UGT1A6P19224 532 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 MSH3P20585 1137 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 UGT1A1P22309 533 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 UGT1A4P22310 534 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 SERPINA4P29622 427 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 OXTRP30559 389 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 UGT1A3P35503 534 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 UGT1A5P35504 534 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 HSPA7P48741 367 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 CYP4F8P98187 520 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 TLE2Q04725 743 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRAF3Q13114 568 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 CHRNA6Q15825 494 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 ADRM1Q16186 407 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 CYP51A1Q16850 503 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 NHSL2Q5HYW2 709 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 MPP7Q5T2T1 576 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 GPRC6AQ5T6X5 926 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 FAM117BQ6P1L5 589 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 MACC1Q6ZN28 852 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 PRR23BQ6ZRT6 265 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 HID1Q8IV36 788 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 BBS7Q8IWZ6 715 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 CBARPQ8N350 705 aaPredicted RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRPV3Q8NET8 790 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 FIBINQ8TAL6 211 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 MRPS31Q92665 395 aaKnown RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 EGFL8Q99944 293 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 HTATIP2Q9BUP3 242 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 TNKS2Q9H2K2 1166 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 INTS7Q9NVH2 962 aaKnown RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 DUS2Q9NX74 493 aaKnown RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 ELOVL2Q9NXB9 296 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLAMF8Q9P0V8 285 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 CFAP97Q9P2B7 532 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 OGDHLQ9ULD0 1010 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 OBSL1O75147 1896 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 MYOCOSA0A1B0GUC4 107 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 TCRBV5S2A0A599 114 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 TEX28O15482 410 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZNF821O75541 412 aaPredicted RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 SPATA31D3P0C874 917 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 G6PDP11413 515 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 MTHFD1P11586 935 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 BMP1P13497 986 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 HTR1EP28566 365 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 CD70P32970 193 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC7A9P82251 487 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ABRAXAS2Q15018 415 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC5A9Q2M3M2 681 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 AP5B1Q2VPB7 878 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 PLEKHG6Q3KR16 790 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRIM60Q495X7 471 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 NADK2Q4G0N4 442 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 HABP4Q5JVS0 413 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 DGKKQ5KSL6 1271 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 SULT1C3Q6IMI6 304 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 KRT80Q6KB66 452 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC2A7Q6PXP3 512 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 CYP20A1Q6UW02 462 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 TPGS1Q6ZTW0 290 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 SPATA31D4Q6ZUB0 917 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 NXPE1Q8N323 547 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 CBR4Q8N4T8 237 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 METTL25Q8N6Q8 603 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 MFSD2AQ8NA29 543 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 OR2AP1Q8NGE2 309 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 CENPNQ96H22 339 aaPredicted RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 PPP3R2Q96LZ3 170 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 TMEM74Q96NL1 305 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 TOX2Q96NM4 488 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 HBEGFQ99075 208 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 C9orf16Q9BUW7 83 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 APOL5Q9BWW9 433 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 LRRC3Q9BY71 257 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ANKRD60Q9BZ19 345 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 CD244Q9BZW8 370 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 GRIP2Q9C0E4 1043 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 VCX3AQ9NNX9 186 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 PNPLA3Q9NST1 481 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 WWOXQ9NZC7 414 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 OPTCQ9UBM4 332 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZMYM5Q9UJ78 669 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 CLEC4EQ9ULY5 219 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ANGPTL3Q9Y5C1 460 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZNF106Q9H2Y7 1883 aaKnown RBP8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 SCN8AQ9UQD0 1980 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ARHGAP10A1A4S6 786 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 FAM149AA5PLN7 773 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 A8MX80 341 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ARNTLO00327 626 aa8.18□□□□□ -1.1
SND1-IT1-201ENST00000623342 ANKRD28O15084 1053 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms