RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 LINC00615Q96LM1 132 aaPredicted RBP12.78□□□□□ -0.36
ATRX-208ENST00000622960 CATSPER2Q96P56 530 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 OR6C1Q96RD1 312 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 FAM96AQ9H5X1 160 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 FANCEQ9HB96 536 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 NLE1Q9NVX2 485 aaPredicted RBP12.78□□□□□ -0.36
ATRX-208ENST00000622960 OGFRQ9NZT2 677 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 PILRAQ9UKJ1 303 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 R3HDM2Q9Y2K5 976 aaKnown RBP12.78□□□□□ -0.36
ATRX-208ENST00000622960 CFAP20Q9Y6A4 193 aaKnown RBP12.78□□□□□ -0.36
ATRX-208ENST00000622960 BPTFQ12830 3046 aa12.77□□□□□ -0.36
ATRX-208ENST00000622960 C17orf113A0A1B0GUU1 675 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 HEATR9A2RTY3 570 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 TLCD2A6NGC4 264 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 AGAP14A8MT82 685 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 H7C0S8 307 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 LDB2O43679 373 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 LIASO43766 372 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 KDM1AO60341 852 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 FTH1P02794 183 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 POLBP06746 335 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 CCNYL3P0C7X3 344 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 TPH1P17752 444 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 ACRV1P26436 265 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 XIAPP98170 497 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 ACY1Q03154 408 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 SRSF6Q13247 344 aaKnown RBP12.77□□□□□ -0.37
ATRX-208ENST00000622960 TUBB3Q13509 450 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 MAP7Q14244 749 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 SYTL3Q4VX76 610 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 LYPLAL1Q5VWZ2 237 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 DENND5AQ6IQ26 1287 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 GSTA5Q7RTV2 222 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 SERPINA9Q86WD7 417 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 KMT5CQ86Y97 462 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 SLC13A5Q86YT5 568 aaPredicted RBP12.77□□□□□ -0.37
ATRX-208ENST00000622960 KLHDC8BQ8IXV7 354 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 ZNF843Q8N446 348 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 EXTL1Q92935 676 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 TSSK1BQ9BXA7 367 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 FAM117AQ9C073 453 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 KIR3DX1Q9H7L2 352 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 APMAPQ9HDC9 416 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 LZTFL1Q9NQ48 299 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 HRASLS2Q9NWW9 162 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 SIDT1Q9NXL6 827 aaKnown RBP12.77□□□□□ -0.37
ATRX-208ENST00000622960 PAK5Q9P286 719 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 LNPEPQ9UIQ6 1025 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 RARRES3Q9UL19 164 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 TMEM184BQ9Y519 407 aaPredicted RBP12.77□□□□□ -0.37
ATRX-208ENST00000622960 PCDHB3Q9Y5E6 796 aa12.77□□□□□ -0.37
ATRX-208ENST00000622960 SDK2Q58EX2 2172 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 A0A0U1RQJ8 604 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 TCRBV7S2A1N4TA0A589 114 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 OR5K3A6NET4 321 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 CCL22O00626 93 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 C1QL1O75973 258 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 AP2A2O94973 939 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 NELFEP18615 380 aaKnown RBP12.76□□□□□ -0.37
ATRX-208ENST00000622960 MSNP26038 577 aaKnown RBP12.76□□□□□ -0.37
ATRX-208ENST00000622960 NSG1P42857 185 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 PRAMEP78395 509 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 RPA4Q13156 261 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 SNX1Q13596 522 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 BORAQ6PGQ7 559 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 C6orf15Q6UXA7 325 aaPredicted RBP12.76□□□□□ -0.37
ATRX-208ENST00000622960 C4orf22Q6V702 233 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 NLRP9Q7RTR0 991 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 HOOK3Q86VS8 718 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 BPHLQ86WA6 291 aaPredicted RBP12.76□□□□□ -0.37
ATRX-208ENST00000622960 CARFQ8N187 725 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 ACVR1CQ8NER5 493 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 PPHLN1Q8NEY8 458 aaKnown RBP12.76□□□□□ -0.37
ATRX-208ENST00000622960 TRIM58Q8NG06 486 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 ELMO2Q96JJ3 720 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 INSM2Q96T92 566 aaPredicted RBP12.76□□□□□ -0.37
ATRX-208ENST00000622960 COG4Q9H9E3 785 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 RAB6BQ9NRW1 208 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 SOHLH2Q9NX45 425 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 SMARCAL1Q9NZC9 954 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 SLC24A2Q9UI40 661 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 ANAPC5Q9UJX4 755 aa12.76□□□□□ -0.37
ATRX-208ENST00000622960 CCDC78A2IDD5 438 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 OR6C74A6NCV1 312 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 AP3B1O00203 1094 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 LIN7AO14910 233 aaPredicted RBP12.75□□□□□ -0.37
ATRX-208ENST00000622960 KIF1CO43896 1103 aaKnown RBP12.75□□□□□ -0.37
ATRX-208ENST00000622960 KIAA0754O94854 1291 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 ZBTB11O95625 1053 aaPredicted RBP12.75□□□□□ -0.37
ATRX-208ENST00000622960 OR56A5P0C7T3 313 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 CCR10P46092 362 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 ARSDP51689 593 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 HSD11B2P80365 405 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 PLOD1Q02809 727 aaPredicted RBP12.75□□□□□ -0.37
ATRX-208ENST00000622960 ITIH4Q14624 930 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.75□□□□□ -0.37
ATRX-208ENST00000622960 AARS2Q5JTZ9 985 aaKnown RBP12.75□□□□□ -0.37
ATRX-208ENST00000622960 MEI1Q5TIA1 1274 aa12.75□□□□□ -0.37
ATRX-208ENST00000622960 DUS1LQ6P1R4 473 aaKnown RBP12.75□□□□□ -0.37
ATRX-208ENST00000622960 AFTPHQ6ULP2 937 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms