RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ARF4P18085 180 aaPredicted RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 TNNI3P19429 210 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 TPSB2P20231 275 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 RAB3AP20336 220 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 KELP23276 732 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ALDH4A1P30038 563 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 SDC4P31431 198 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 MAGEA12P43365 314 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 NR2C2P49116 596 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ARHGDIAP52565 204 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 GBX2P52951 348 aaPredicted RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 SSTP61278 116 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 NCS1P62166 190 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 FLI1Q01543 452 aaPredicted RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 OLIG2Q13516 323 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 VGLL4Q14135 290 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ZNF267Q14586 743 aaPredicted RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ANGPT1Q15389 498 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 TPSAB1Q15661 275 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 BTBD16Q32M84 506 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 PPM1JQ5JR12 505 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 METTL11BQ5VVY1 283 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 STEAP4Q687X5 459 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 NCBP2-AS2Q69YL0 99 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 TIGD7Q6NT04 549 aaPredicted RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ANKS3Q6ZW76 656 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 PLPPR4Q7Z2D5 763 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 EFL1Q7Z2Z2 1120 aaKnown RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ADGRG3Q86Y34 549 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 CDKL3Q8IVW4 592 aaPredicted RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 SLC22A15Q8IZD6 547 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 PELI3Q8N2H9 469 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 GLB1L3Q8NCI6 653 aaPredicted RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 OR52H1Q8NGJ2 320 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 CDC26Q8NHZ8 85 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 RDH11Q8TC12 318 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 FAM110BQ8TC76 370 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 LGALS12Q96DT0 336 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 MSANTD3Q96H12 275 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 SCYL1Q96KG9 808 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 TEKT5Q96M29 485 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 FYTTD1Q96QD9 318 aaKnown RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ZNF670Q9BS34 389 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 PITHD1Q9GZP4 211 aaPredicted RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 DCSTAMPQ9H295 470 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 DHX35Q9H5Z1 703 aaKnown RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 SOX17Q9H6I2 414 aaPredicted RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 SP110Q9HB58 689 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 MCCC2Q9HCC0 563 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 TLR9Q9NR96 1032 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 TMPRSS4Q9NRS4 437 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 PIM2Q9P1W9 311 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 MBD2Q9UBB5 411 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ENOPH1Q9UHY7 261 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 GJD2Q9UKL4 321 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ADAM28Q9UKQ2 775 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 ACAD8Q9UKU7 415 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 INTS6Q9UL03 887 aaKnown RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 HSPE1-MOB4S4R3N1 261 aa7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 BRCA1P38398 1863 aaKnown RBP7.4□□□□□ -1.22
TRIM49B-202ENST00000622138 H3BQ06 376 aaPredicted RBP7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 TFECO14948 347 aaPredicted RBP7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 MDM4O15151 490 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 TLL1O43897 1013 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC22A5O76082 557 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC2A3P11169 496 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 ITGALP20701 1170 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 HLA-DMAP28067 261 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC7A2P52569 658 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 ARSFP54793 590 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC6A3Q01959 620 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SLAMF1Q13291 335 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SP140Q13342 867 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 AANATQ16613 207 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SOWAHAQ2M3V2 549 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 BCL7AQ4VC05 210 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM26DQ5JW98 314 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 C6orf132Q5T0Z8 1188 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 RETSATQ6NUM9 610 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 TMEM81Q6P7N7 255 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 CES3Q6UWW8 571 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 KIAA1324Q6UXG2 1013 aaKnown RBP7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM35AQ86V20 835 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 C7orf31Q8N865 590 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SLAIN1Q8ND83 568 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF555Q8NEP9 628 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 OR8K3Q8NH51 312 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 ADAM32Q8TC27 787 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 CSPG4P5Q96PW8 444 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 GAD1Q99259 594 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 LGMNQ99538 433 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 C11orf84Q9BUA3 381 aaPredicted RBP7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 NT5C1AQ9BXI3 368 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 CYP4F12Q9HCS2 524 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 TXNRD2Q9NNW7 524 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC35C2Q9NQQ7 365 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF358Q9NW07 568 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 WDR70Q9NW82 654 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms