RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ADAM17P78536 824 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ADARB1P78563 741 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SLC10A7Q0GE19 358 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 GALNT3Q14435 633 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SMN1Q16637 294 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 C6orf141Q5SZD1 244 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SDHAF4Q5VUM1 108 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TRAF7Q6Q0C0 670 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 PAQR3Q6TCH7 311 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 NECAB2Q7Z6G3 386 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CILP2Q8IUL8 1156 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CLHC1Q8NHS4 586 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 KCNN1Q92952 543 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ZFYVE19Q96K21 471 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 UROC1Q96N76 676 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 VAT1Q99536 393 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 DOK1Q99704 481 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ATP13A3Q9H7F0 1226 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 NTN4Q9HB63 628 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ENTPD7Q9NQZ7 604 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 USE1Q9NZ43 259 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 A0A1W2PP18 115 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ARVCFO00192 962 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 BTN3A1O00481 513 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TPD52L2O43399 206 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 NDUFS2O75306 463 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 PAGE1O75459 146 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SEC24AO95486 1093 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 FADS2O95864 444 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 GOT2P00505 430 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 GSNP06396 782 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 COL11A2P13942 1736 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 IL12AP29459 219 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 DEFA1P59665 94 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 DEFA3P59666 94 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TUSC3Q13454 348 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 DAG1Q14118 895 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF846Q147U1 533 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 OXA1LQ15070 435 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 DPY19L1Q2PZI1 675 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CACHD1Q5VU97 1274 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ANKS6Q68DC2 871 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TAPT1Q6NXT6 567 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 C17orf99Q6UX52 265 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SLC24A5Q71RS6 500 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SDK1Q7Z5N4 2213 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SYTL1Q8IYJ3 562 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 PHACTR4Q8IZ21 702 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 POC5Q8NA72 575 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 LPCAT1Q8NF37 534 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ZMIZ2Q8NF64 920 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 OSCP1Q8WVF1 389 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TMEM40Q8WWA1 233 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 UBE2FQ969M7 185 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 NT5C3BQ969T7 300 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 PARVBQ9HBI1 364 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TRMT13Q9NUP7 481 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 UXTQ9UBK9 157 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 VPS4AQ9UN37 437 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 KNL1Q8NG31 2342 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF831Q5JPB2 1677 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ASPDHA6ND91 283 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 MAFKO60675 156 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CNMDO75829 334 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SEC14L2O76054 403 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 OR4F21O95013 312 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 HTR1AP08908 422 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF177Q13360 481 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 MADCAM1Q13477 382 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CDH18Q13634 790 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SKIV2LQ15477 1246 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 FAM98BQ52LJ0 330 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CATSPEREQ5SY80 951 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SULT1C3Q6IMI6 304 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TXNDC11Q6PKC3 985 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 GCNT7Q6ZNI0 430 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 DET1Q7L5Y6 550 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 EFL1Q7Z2Z2 1120 aaKnown RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 C14orf80Q86SX3 495 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ATP6V0D2Q8N8Y2 350 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SCAIQ8N9R8 606 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 VPS37AQ8NEZ2 397 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 OR13J1Q8NGT2 312 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 STARD8Q92502 1023 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 RORBQ92753 470 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 AURKBQ96GD4 344 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 UBXN10Q96LJ8 280 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TSPAN18Q96SJ8 248 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 PAAF1Q9BRP4 392 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 HGH1Q9BTY7 390 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 AMBRA1Q9C0C7 1298 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 CLPBQ9H078 707 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 RIBC2Q9H4K1 309 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 ZFP14Q9HCL3 533 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TLR9Q9NR96 1032 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 SDR39U1Q9NRG7 319 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-216ENST00000620854 GIMAP4Q9NUV9 329 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 FAM118AQ9NWS6 357 aa6.86□□□□□ -1.31
NEDD9-216ENST00000620854 TRPM5Q9NZQ8 1165 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms