RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 OR52L1Q8NGH7 329 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 NACC2Q96BF6 587 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 COPS8Q99627 209 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 NFKBIZQ9BYH8 718 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MFSD1Q9H3U5 465 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 AKTIPQ9H8T0 292 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MRPL17Q9NRX2 175 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 TMEM9Q9P0T7 183 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TMED5Q9Y3A6 229 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 RAI2Q9Y5P3 530 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SPHKAPQ2M3C7 1700 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TRAV19A0A0A6YYK7 116 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ISPDA4D126 451 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 E7ENX8 843 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 STX16-NPEPL1H3BU86 382 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PTSQ03393 145 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FOXM1Q08050 763 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 HSDL1Q3SXM5 330 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 NOMO2Q5JPE7 1267 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SLC39A4Q6P5W5 647 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.02□□□□□ -1.93
LPP-221ENST00000618621 SMYD1Q8NB12 490 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ZNF248Q8NDW4 579 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 BRSK1Q8TDC3 778 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 LRTOMTQ8WZ04 291 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 AP2M1Q96CW1 435 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TMEM169Q96HH4 297 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 BIRC8Q96P09 236 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 VPS35Q96QK1 796 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ASB8Q9H765 288 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PCP4L1A6NKN8 68 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CATP04040 527 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 NTSP30990 170 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SH3PXD2AQ5TCZ1 1133 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ALDH16A1Q8IZ83 802 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 JOSD2Q8TAC2 188 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PLEKHO2Q8TD55 490 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 DIRAS2Q96HU8 199 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SNX27Q96L92 541 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MGME1Q9BQP7 344 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CNOT11Q9UKZ1 510 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 RAB23Q9ULC3 237 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CNTN6Q9UQ52 1028 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 USP2O75604 605 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 CYP11A1P05108 521 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ASPAP45381 313 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GALNT3Q14435 633 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 DUOXA1Q1HG43 343 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PLET1Q6UQ28 207 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PAMR1Q6UXH9 720 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CMC1Q7Z7K0 106 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ASZ1Q8WWH4 475 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 JPH3Q8WXH2 748 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 KCTD13Q8WZ19 329 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FEM1CQ96JP0 617 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 EBF4Q9BQW3 602 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 RACGAP1Q9H0H5 632 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MED28Q9H204 178 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ACSS2Q9NR19 701 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 EHD3Q9NZN3 535 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CAMTA1Q9Y6Y1 1673 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.02□□□□□ -1.933e-6■■□□□ 12.1
LPP-221ENST00000618621 CCDC163A0A0D9SF12 145 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CHST10O43529 356 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PRMT3O60678 531 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CLDN11O75508 207 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GALK2Q01415 458 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 LAPTM5Q13571 262 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TAF1AQ15573 450 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 REP15Q6BDI9 236 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CCSAPQ6IQ19 270 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 KLHL24Q6TFL4 600 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GK5Q6ZS86 529 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 DEFB128Q7Z7B8 93 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SIX5Q8N196 739 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 HASPINQ8TF76 798 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CUEDC1Q9NWM3 386 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 TCAF1Q9Y4C2 921 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MAP4K5Q9Y4K4 846 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 URADA6NGE7 173 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FAM25EA8MYX2 175 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 EDIL3O43854 480 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 OR10H3O60404 316 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 DLX3O60479 287 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FGF19O95750 216 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 C8GP07360 202 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ZNF286BP0CG31 522 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ATP4BP51164 291 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 NAE1Q13564 534 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GTF2H2Q13888 395 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SLC9A4Q6AI14 798 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GTF2H2CQ6P1K8 395 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FAM131AQ6UXB0 335 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FRMD7Q6ZUT3 714 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 C16orf59Q7L2K0 433 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PANX1Q96RD7 426 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 HTATIP2Q9BUP3 242 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GPR88Q9GZN0 384 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ZNF696Q9H7X3 374 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ENTPD4Q9Y227 616 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms