RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 FER1L6Q2WGJ9 1857 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 FAM172BPA6NC97 362 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 H3BNX3 289 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 H3BUI4 141 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 TFECO14948 347 aaPredicted RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 CCNB2O95067 398 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 GNAZP19086 355 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 TSPAN5P62079 268 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 GNA12Q03113 381 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 FAM189A2Q15884 450 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 MTX3Q5HYI7 312 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 PMEPA1Q969W9 287 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 LDAHQ9H6V9 325 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 SQORQ9Y6N5 450 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 H0YJX3 145 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 PSMD9O00233 223 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 DUSP11O75319 330 aaKnown RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 PRAMEF12O95522 483 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 TACR2P21452 398 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 CCNCP24863 283 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 HSD11B1P28845 292 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 TLR1Q15399 786 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 COLEC12Q5KU26 742 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 AAGABQ6PD74 315 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 RBM44Q6ZP01 1051 aaKnown RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 PRR23BQ6ZRT6 265 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 SLC29A4Q7RTT9 530 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 AMZ2Q86W34 360 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 LENG1Q96BZ8 264 aaPredicted RBP11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 B3GAT2Q9NPZ5 323 aa11.03□□□□□ -0.64
CCDC144B-208ENST00000618081 ARL5CA6NH57 179 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 BANF1O75531 89 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 CTSOP43234 321 aaPredicted RBP11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 CRELD2Q6UXH1 353 aaPredicted RBP11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 ZFPM1Q8IX07 1006 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 ZCCHC10Q8TBK6 192 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 HAS1Q92839 578 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 ZNF514Q96K75 400 aaPredicted RBP11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 ALG2Q9H553 416 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 PCDH18Q9HCL0 1135 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 A0A075B6Q4 140 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 CDC40O60508 579 aaKnown RBP eCLIP11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 NOS1APO75052 506 aaPredicted RBP11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 TACSTD2P09758 323 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 NR4A1P22736 598 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 CAP1Q01518 475 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 E2F2Q14209 437 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 TYSND1Q2T9J0 566 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 EARS2Q5JPH6 523 aaKnown RBP11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 ADNP2Q6IQ32 1131 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 LCLAT1Q6UWP7 414 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 ZSCAN1Q8NBB4 408 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 OR10H4Q8NGA5 316 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 C1orf216Q8TAB5 229 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 ING5Q8WYH8 240 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 COQ8BQ96D53 544 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 CCDC115Q96NT0 180 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 PCDHGC3Q9UN70 934 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 CDC14AQ9UNH5 594 aa11.02□□□□□ -0.64
CCDC144B-208ENST00000618081 ZBTB48P10074 688 aaPredicted RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 MTTPP55157 894 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 CBX3Q13185 183 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 SMARCD3Q6STE5 483 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 DGLUCYQ7Z3D6 616 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 TPK1Q9H3S4 243 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 PNPLA8Q9NP80 782 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF282Q9UDV7 671 aaPredicted RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 FAM198AQ9UFP1 575 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF639Q9UID6 485 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 RPL26L1Q9UNX3 145 aaKnown RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 OR1I1O60431 355 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 AHCYP23526 432 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 DCKP27707 260 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 HOXA10P31260 410 aaPredicted RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 PLGLB1Q02325 96 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 AUHQ13825 339 aaKnown RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 EML3Q32P44 896 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 DNM1P34Q6PK57 102 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ZYG11AQ6WRX3 759 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 TMEM17Q86X19 198 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 C7orf61Q8IZ16 206 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 THUMPD1Q9NXG2 353 aaKnown RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 TAS2R7Q9NYW3 318 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 SIRPGQ9P1W8 387 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 CPSF4LA6NMK7 179 aaKnown RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 WASP42768 502 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 RPS9P46781 194 aaKnown RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 DLG2Q15700 870 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 PLEKHG4Q58EX7 1191 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ZZZ3Q8IYH5 903 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ZMIZ2Q8NF64 920 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ZSWIM3Q96MP5 696 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 DGAT2Q96PD7 388 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 CSPG4P5Q96PW8 444 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ACBD6Q9BR61 282 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 COMMD3-BMI1R4GMX3 469 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ARFGEF2Q9Y6D5 1785 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC31A1O15431 190 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms