RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 TBKBP1A7MCY6 615 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 TTC34A8MYJ7 566 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 HOXC11O43248 304 aaPredicted RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 GAS2O43903 313 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 TULP3O75386 442 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 NDUFS3O75489 264 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 GABARAPO95166 117 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 SERPINA1P01009 418 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 CSF2P04141 144 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 CHRM5P08912 532 aaPredicted RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 GADD45AP24522 165 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 EIF2DP41214 584 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 DSC2Q02487 901 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 C9orf57Q5W0N0 161 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 SDE2Q6IQ49 451 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 GPR153Q6NV75 609 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 PAQR3Q6TCH7 311 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 BEND5Q7L4P6 421 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 UNC93AQ86WB7 457 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 HIPK1Q86Z02 1210 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 TCAIMQ8N3R3 496 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 SETD9Q8NE22 299 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 UTP15Q8TED0 518 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 MBOAT4Q96T53 435 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 SLC39A8Q9C0K1 460 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 PDGFDQ9GZP0 370 aaPredicted RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 CARS2Q9HA77 564 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 SP110Q9HB58 689 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 TLR9Q9NR96 1032 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 TOR4AQ9NXH8 423 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 FBXW11Q9UKB1 542 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 EIF3LQ9Y262 564 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 SPEF1Q9Y4P9 236 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 GPR45Q9Y5Y3 372 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 DNMT3AQ9Y6K1 912 aaPredicted RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 DOCK5Q9H7D0 1870 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 CXCR6O00574 342 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 WDR47O94967 919 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 HTR1EP28566 365 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 AKT1P31749 480 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 DCTP40126 519 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 TAF6P49848 677 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ATP4BP51164 291 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 DGKEP52429 567 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 CXCL9Q07325 125 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 PTGR1Q14914 329 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 AP5B1Q2VPB7 878 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 FAM174BQ3ZCQ3 159 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 CEP78Q5JTW2 689 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ATAD3CQ5T2N8 411 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 KIAA0930Q6ICG6 404 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 NEK10Q6ZWH5 1172 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 GDPD3Q7L5L3 318 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 TMEM179BQ7Z7N9 219 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 DCP2Q8IU60 420 aaKnown RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 TTC29Q8NA56 475 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 PIK3C3Q8NEB9 887 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 BPIFB1Q8TDL5 484 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 TXNDC15Q96J42 360 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 TPD52L3Q96J77 140 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 APOL4Q9BPW4 351 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 DUSP16Q9BY84 665 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 NECTIN3Q9NQS3 549 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 NDFIP2Q9NV92 336 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ERAP1Q9NZ08 941 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 PDP1Q9P0J1 537 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 VAPAQ9P0L0 249 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 PCDHGA10Q9Y5H3 936 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 A0A096LPI6 279 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 A0A1W2PQ72 361 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ELOVL7A1L3X0 281 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ASPDHA6ND91 283 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 TRIM64A6NGJ6 449 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 TSPAN1O60635 241 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 CRYZL1O95825 349 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 HMBSP08397 361 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 CXCR2P25025 360 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 C21orf33P30042 268 aaPredicted RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 GRIK1P39086 918 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 HTR6P50406 440 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 GNG2P59768 71 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 ISL1P61371 349 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 SNRPD2P62316 118 aaKnown RBP6.57□□□□□ -1.36
LMO3-235ENST00000616247 CBLBQ13191 982 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 GALNT3Q14435 633 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 NKG7Q16617 165 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 DDR2Q16832 855 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 BCL7AQ4VC05 210 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 C6orf136Q5SQH8 315 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 GPRIN3Q6ZVF9 776 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 GPRIN1Q7Z2K8 1008 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 SYVN1Q86TM6 617 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 CYP4Z1Q86W10 505 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 GALNT13Q8IUC8 556 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 STX19Q8N4C7 294 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 OR13C4Q8NGS5 318 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 STAG3L4Q8TBR4 150 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 DYNC2LI1Q8TCX1 351 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 RMDN1Q96DB5 314 aa6.57□□□□□ -1.36
LMO3-235ENST00000616247 VMP1Q96GC9 406 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms