RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ZNF226Q9NYT6 803 aa9.18□□□□□ -0.94
COL12A1-211ENST00000615798 MFSD11O43934 449 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 DFNA5O60443 496 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ERVK-10P10266 1014 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 PSMA6P60900 246 aaKnown RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ABRAQ8N0Z2 381 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SPATA33Q96N06 139 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 GPATCH2Q9NW75 528 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 CCDC167Q9P0B6 97 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 TMEM139Q8IV31 216 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 RASGEF1CQ8N431 466 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 MAGEB10Q96LZ2 347 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 LGR4Q9BXB1 951 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SLC4A5Q9BY07 1137 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 NRXN3Q9Y4C0 1643 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SH3PXD2BA1X283 911 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 MAGEB4O15481 346 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 E2F1Q01094 437 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF268Q14587 947 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 CRY2Q49AN0 593 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 OVOS1Q6IE37 1185 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 OGFOD2Q6N063 350 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 C19orf35Q6ZS72 473 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SLC9B2Q86UD5 537 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SVBPQ8N300 66 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 CERKQ8TCT0 537 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 MITD1Q8WV92 249 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SLC38A4Q969I6 547 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SMPD3Q9NY59 655 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SIX4Q9UIU6 781 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 HACD1B0YJ81 288 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 KLRC4O43908 158 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ODC1P11926 461 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 GNB3P16520 340 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF829Q3KNS6 432 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 CRTC2Q53ET0 693 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 HSPBAP1Q96EW2 488 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 AURKBQ96GD4 344 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 NECAB3Q96P71 396 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 NPAS2Q99743 824 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 RAVER2Q9HCJ3 691 aaKnown RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 MC2RQ01718 297 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF484Q5JVG2 852 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 COMMD4Q9H0A8 199 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 NEUROD4Q9HD90 331 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 MTRRQ9UBK8 725 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 GRID2O43424 1007 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SERPINA6P08185 405 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ARHGAP11BQ3KRB8 267 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 EIPR1Q53HC9 387 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 MTX3Q5HYI7 312 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 MOB2Q70IA6 237 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 TMPRSS7Q7RTY8 843 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SLC29A1Q99808 456 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SPATA9Q9BWV2 254 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ASB7Q9H672 318 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 PHRF1Q9P1Y6 1649 aaKnown RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 A0A0A6YYH2 397 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 A6NJ64 397 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SEC22BO75396 215 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 APOA2P02652 100 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 NTSP30990 170 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 HERVK_113P63132 956 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 COL13A1Q5TAT6 717 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 C11orf65Q8NCR3 313 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 NPRL2Q8WTW4 380 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 NMRAL1Q9HBL8 299 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 MID1IP1Q9NPA3 183 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 FETUBQ9UGM5 382 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 CARNS1A5YM72 827 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 GEMP55040 296 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF155Q12901 538 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 GK2Q14410 553 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ARL14Q8N4G2 192 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 POTEKPQ9BYX7 375 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 PDE10AQ9Y233 779 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 RNF212BA8MTL3 300 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 OR2B3O76000 313 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 CCNB2O95067 398 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 RPL14P50914 215 aaKnown RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 WDR53Q7Z5U6 358 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 PIAS4Q8N2W9 510 aaPredicted RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 OR2T34Q8NGX1 318 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 OR2T3Q8NH03 318 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 SSU72Q9NP77 194 aaKnown RBP9.17□□□□□ -0.94
COL12A1-211ENST00000615798 HCN3Q9P1Z3 774 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 ACSL6Q9UKU0 697 aa9.17□□□□□ -0.94
COL12A1-211ENST00000615798 APOC4-APOC2K7ER74 178 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 APOC2P02655 101 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 AXLP30530 894 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 TXNRD3Q86VQ6 643 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PLEKHO2Q8TD55 490 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 SLC20A1Q8WUM9 679 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PMM1Q92871 262 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 PHOX2BQ99453 314 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 EBNA1BP2Q99848 306 aaKnown RBP9.16□□□□□ -0.94
COL12A1-211ENST00000615798 IL17RBQ9NRM6 502 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 FLVCR2Q9UPI3 526 aa9.16□□□□□ -0.94
COL12A1-211ENST00000615798 NCF1BA6NI72 391 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms