RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 FAM110CQ1W6H9 321 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 CRY2Q49AN0 593 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 GPR158Q5T848 1215 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TCEAL6Q6IPX3 200 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 MSANTD2Q6P1R3 559 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 CHST9Q7L1S5 443 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 GALNT7Q86SF2 657 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 GPR135Q8IZ08 494 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 ZNF567Q8N184 647 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 MTMR14Q8NCE2 650 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 NEK7Q8TDX7 302 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 COPS5Q92905 334 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 EFHD2Q96C19 240 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 NXNL1Q96CM4 212 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 ZBED6CLQ96FA7 236 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 NODALQ96S42 347 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 LGR4Q9BXB1 951 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 IPPKQ9H8X2 491 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 POLR3BQ9NW08 1133 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 CNTN6Q9UQ52 1028 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TJP1Q07157 1748 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 C5P01031 1676 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 FAM240BA0A1B0GVZ2 78 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 KCNU1A8MYU2 1149 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 PDPK1O15530 556 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 B4GALT5O43286 388 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 BUD23O43709 281 aaKnown RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 PSIP1O75475 530 aaKnown RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 ANXA4P09525 319 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 CDH1P12830 882 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 UGT1A3P35503 534 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 PLA2G4EQ3MJ16 856 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 RALGPS1Q5JS13 557 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 FAM91A1Q658Y4 838 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 OLFML1Q6UWY5 402 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 LRRC70Q7Z2Q7 622 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 CACUL1Q86Y37 369 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 AVL9Q8NBF6 648 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 JOSD2Q8TAC2 188 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 CCDC107Q8WV48 283 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 CNPPD1Q9BV87 410 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 IMP3Q9NV31 184 aaKnown RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 C2CD4BA6NLJ0 364 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 E7ENX8 843 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 IRAK2O43187 625 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TLL1O43897 1013 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 NME6O75414 186 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 ZNF3P17036 446 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 KCNA5P22460 613 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TIE1P35590 1138 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 E2F2Q14209 437 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 FAM189A2Q15884 450 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D25Q3MII6 688 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 IFI44LQ53G44 452 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 IL23RQ5VWK5 629 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 MAP1SQ66K74 1059 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 RASSF6Q6ZTQ3 369 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 LAPTM4BQ86VI4 370 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 C9orf43Q8TAL5 461 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 HMCESQ96FZ2 354 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 ERMAPQ96PL5 475 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 GPER1Q99527 375 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 HTATIP2Q9BUP3 242 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 SPATA9Q9BWV2 254 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 RUVBL1Q9Y265 456 aaKnown RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 AIREO43918 545 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TRIM3O75382 744 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 MATN4O95460 622 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 EOMESO95936 686 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 ATP5A1P25705 553 aaKnown RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 RPIAP49247 311 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 ALDH3A2P51648 485 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 CCR8P51685 355 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 PDX1P52945 283 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TARBP2Q15633 366 aaKnown RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 SLC1A5Q15758 541 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 DPYSL2Q16555 572 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 SMYD5Q6GMV2 418 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 AHSA2Q719I0 299 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 NPAS4Q8IUM7 802 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 MAB21L3Q8N8X9 362 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 WFIKKN2Q8TEU8 576 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 SNX33Q8WV41 574 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 UPF1Q92900 1129 aaKnown RBP eCLIP4.51□□□□□ -1.69
CHD9-221ENST00000615216 ZNF514Q96K75 400 aaPredicted RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 EXOC2Q96KP1 924 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 PLEKHA1Q9HB21 404 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TLR6Q9Y2C9 796 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TMED5Q9Y3A6 229 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 OAS3Q9Y6K5 1087 aaKnown RBP4.51□□□□□ -1.69
CHD9-221ENST00000615216 CAMTA1Q9Y6Y1 1673 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 LRRC72A6NJI9 287 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 CCNKO75909 580 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TFPIP10646 304 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 GABRR2P28476 465 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TUBA3CQ13748 450 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TREML2Q5T2D2 321 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 ABHD13Q7L211 337 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 TAF8Q7Z7C8 310 aa4.51□□□□□ -1.69
CHD9-221ENST00000615216 PLCZ1Q86YW0 608 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms