RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 NSUN3Q9H649 340 aaKnown RBP8.7□□□□□ -1.02
VPS11-206ENST00000614944 KCNK9Q9NPC2 374 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 RIC8BQ9NVN3 520 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 CORINQ9Y5Q5 1042 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 HCFC2Q9Y5Z7 792 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ZBTB14O43829 449 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 NADKO95544 446 aaPredicted RBP8.7□□□□□ -1.02
VPS11-206ENST00000614944 SERPINB5P36952 375 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ALDH3B2P48448 385 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 RENBPP51606 427 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 LIMK1P53667 647 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 DMC1Q14565 340 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 KYNUQ16719 465 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 PGS1Q32NB8 556 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS11-206ENST00000614944 RAP1GAP2Q684P5 730 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 PLBD1Q6P4A8 553 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 RIPOR1Q6ZS17 1223 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 STRA8Q7Z7C7 330 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 AMIGO2Q86SJ2 522 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 GPR149Q86SP6 731 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 TDRPQ86YL5 185 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 MIB1Q86YT6 1006 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 HS6ST3Q8IZP7 471 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ZNF567Q8N184 647 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 C12orf43Q96C57 262 aaKnown RBP8.7□□□□□ -1.02
VPS11-206ENST00000614944 NSL1Q96IY1 281 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 SLA2Q9H6Q3 261 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ATP13A1Q9HD20 1204 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 MLXIPLQ9NP71 852 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 TOR4AQ9NXH8 423 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 COQ3Q9NZJ6 369 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 AAR2Q9Y312 384 aaKnown RBP8.7□□□□□ -1.02
VPS11-206ENST00000614944 CBY1Q9Y3M2 126 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 MFHAS1Q9Y4C4 1052 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 CCDC85CA6NKD9 419 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 GRXCR1A8MXD5 290 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 AP2A1O95782 977 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 TTC4O95801 387 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 EPCAMP16422 314 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 CSNK1DP48730 415 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ACTR3P61158 418 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ESRRGP62508 458 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 GPLD1P80108 840 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 LGALS3BPQ08380 585 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 MAJINQ3KP22 176 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 PLEKHM3Q6ZWE6 761 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 LINC00523Q86TU6 105 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 TSPAN14Q8NG11 270 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 GAS2L1Q99501 681 aaPredicted RBP8.7□□□□□ -1.02
VPS11-206ENST00000614944 TMEM246Q9BRR3 403 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 SLC46A2Q9BY10 475 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 ARNT2Q9HBZ2 717 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 CRLF2Q9HC73 371 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 GDE1Q9NZC3 331 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 EBF1Q9UH73 591 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 OR51B4Q9Y5P0 310 aa8.7□□□□□ -1.02
VPS11-206ENST00000614944 HMX3A6NHT5 357 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SLC9B1P1A6NJY1 282 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 RIPK2O43353 540 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 MAGEC1O60732 1142 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 RAMP2O60895 175 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 NIPSNAP2O75323 286 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SCO1O75880 301 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ANXA9O76027 345 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 MFN2O95140 757 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SNX4O95219 450 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SERPINB1P30740 379 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 IDUAP35475 653 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 DBPQ10586 325 aaPredicted RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 INO80DQ53TQ3 878 aaPredicted RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 ESCO2Q56NI9 601 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 RSBN1Q5VWQ0 802 aaPredicted RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 STEAP4Q687X5 459 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 LGI2Q8N0V4 545 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 TEX19Q8NA77 164 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 TIFAQ96CG3 184 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 BCL2L14Q9BZR8 327 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 LRRC40Q9H9A6 602 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SLC28A3Q9HAS3 691 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SLC24A2Q9UI40 661 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 CLEC4AQ9UMR7 237 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SNX10Q9Y5X0 201 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 LEFTY2O00292 366 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 TM9SF1O15321 606 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ZSCAN5DPP0CG00 497 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 GP5P40197 560 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 CAPZA2P47755 286 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 NAB1Q13506 487 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 PRPSAP1Q14558 356 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 HIF1AQ16665 826 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 GRAMD1BQ3KR37 738 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 PERM1Q5SV97 790 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 GARNL3Q5VVW2 1013 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 FKBP9P1Q75LS8 142 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 CLNKQ7Z7G1 428 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ZSWIM9Q86XI8 627 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 TBC1D19Q8N5T2 526 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 POU5F2Q8N7G0 328 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ARL14EPQ8N8R7 260 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms