RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ZCWPW2A0A1B0GU75 182 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 TOR1BO14657 336 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 CAPN5O15484 640 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ZSCAN12O43309 604 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 PHF2O75151 1096 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ERVK-10P10266 1014 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 GABRB3P28472 473 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 SLC5A2P31639 672 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 TNNT3P45378 269 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 FASLGP48023 281 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 BIRC2Q13490 618 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 KIAA1614Q5VZ46 1190 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 PIM3Q86V86 326 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ZSCAN30Q86W11 494 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 GIMAP7Q8NHV1 300 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ZNF592Q92610 1267 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 CALR3Q96L12 384 aaKnown RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 SIGLEC10Q96LC7 697 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 BIRC8Q96P09 236 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 MAP3K3Q99759 626 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ZMYND15Q9H091 742 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 DPH5Q9H2P9 285 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 FBXO6Q9NRD1 293 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 SPHK1Q9NYA1 384 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 STOX2Q9P2F5 926 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 NFKBIL1Q9UBC1 381 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 SNX24Q9Y343 169 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 IGLV3-16A0A075B6K0 115 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 PYCARD-AS1I3L0S3 204 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 BTN3A3O00478 584 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 FMO4P31512 558 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 INHBCP55103 352 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 DHX9Q08211 1270 aaKnown RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 HSPA14Q0VDF9 509 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 ZNF549Q6P9A3 640 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 TMEM26Q6ZUK4 368 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 JAMLQ86YT9 394 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 OR4L1Q8NH43 312 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 STYXQ8WUJ0 223 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 ZBTB9Q96C00 473 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 NDNQ99608 321 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 OR52A5Q9H2C5 316 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 SARS2Q9NP81 518 aaKnown RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 SMOXQ9NWM0 555 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 HACD3Q9P035 362 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 MRPS18BQ9Y676 258 aaKnown RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 SAR1BQ9Y6B6 198 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 MAD1L1Q9Y6D9 718 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 UBA6A0AVT1 1052 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 RGSL1A5PLK6 1076 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 CPNE6O95741 557 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 THRAP10827 490 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 POLR2CP19387 275 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 FDFT1P37268 417 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 RPL21P46778 160 aaKnown RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 PRLHRP49683 370 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 EIF3BP55884 814 aaKnown RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 TIAL1Q01085 375 aaKnown RBP eCLIP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 ABRQ12979 859 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 ITGA9Q13797 1035 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 IRGCQ6NXR0 463 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 FAM199XQ6PEV8 388 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 ABRAXAS1Q6UWZ7 409 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 TIPARPQ7Z3E1 657 aaKnown RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 SPACA3Q8IXA5 215 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 TXLNBQ8N3L3 684 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 SLC38A9Q8NBW4 561 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 OR2L2Q8NH16 312 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 ZNF669Q96BR6 464 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 FCRL4Q96PJ5 515 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 NAPGQ99747 312 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-208ENST00000614678 MESP1Q9BRJ9 268 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 COG4Q9H9E3 785 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 ZDHHC3Q9NYG2 299 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 PSAT1Q9Y617 370 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 FLNCQ14315 2725 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 CNTRLQ7Z7A1 2325 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 NBPF19A0A087WUL8 3843 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 OR6C74A6NCV1 312 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 H7C0S8 307 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 MASP2O00187 686 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 PLD2O14939 933 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 KLK10O43240 276 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 RAD51CO43502 376 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 VEGFDO43915 354 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 UBXN7O94888 489 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 HAUS5O94927 633 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 VIPP01282 170 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 FOLR1P15328 257 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 ITGALP20701 1170 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 F8A1P23610 371 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 ADRA1DP25100 572 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 NFKBIAP25963 317 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 PSMB5P28074 263 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 LRP8Q14114 963 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 RTP5Q14D33 572 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 DEFB110Q30KQ9 67 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 LCN10Q6JVE6 187 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 CNSTQ6PJW8 725 aa5.56□□□□□ -1.52
CPNE3-208ENST00000614678 FBXO39Q8N4B4 442 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms