RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 E5RI56 91 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 EIF3FO00303 357 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 ARHGAP33O14559 1287 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 TOR1BO14657 336 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 INPP4BO15327 924 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 SGTAO43765 313 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 MAGEC1O60732 1142 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 KLHL2O95198 593 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 TRIM16O95361 564 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 PAK4O96013 591 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 HOXC4P09017 264 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 GSTM1P09488 218 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 GPR89BP0CG08 455 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 SAT1P21673 171 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 HNRNPA2B1P22626 353 aaKnown RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 RPA3P35244 121 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 ETV4P43268 484 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 PRLHRP49683 370 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 CLCN7P51798 805 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 KPNA2P52292 529 aaKnown RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 CDK3Q00526 305 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 IRF9Q00978 393 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 GSTM4Q03013 218 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 MPP2Q14168 576 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 ZNF460Q14592 562 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 KYAT3Q6YP21 454 aaKnown RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 CDHR3Q6ZTQ4 885 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 ADGRG6Q86SQ4 1221 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 TBC1D1Q86TI0 1168 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 HEATR4Q86WZ0 1026 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 NAXDQ8IW45 347 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 CENPLQ8N0S6 344 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 CLDN19Q8N6F1 224 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 LKAAEAR1Q8TD35 194 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 TCP10LQ8TDR4 215 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 ZNF514Q96K75 400 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 HSPA12BQ96MM6 686 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 TSNARE1Q96NA8 513 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 GPR21Q99679 349 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 SLC13A1Q9BZW2 595 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 WDR26Q9H7D7 661 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 SYTL2Q9HCH5 934 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 TRIM39Q9HCM9 518 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 KCNK9Q9NPC2 374 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 MBNL1Q9NR56 388 aaKnown RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 PHPT1Q9NRX4 125 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 DNAAF2Q9NVR5 837 aaKnown RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 TOR4AQ9NXH8 423 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 TRMT6Q9UJA5 497 aaKnown RBP11.25□□□□□ -0.61
SLIRP-212ENST00000613856 GRID1Q9ULK0 1009 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 DMTF1Q9Y222 760 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 PLLPQ9Y342 182 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 DHRS7Q9Y394 339 aa11.25□□□□□ -0.61
SLIRP-212ENST00000613856 CCDC189A1A4V9 331 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 FAM149AA5PLN7 773 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 RAD51BO15315 384 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 CBFA2T3O75081 653 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 MTX2O75431 263 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 FTH1P02794 183 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 IGHV4-34P06331 123 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 APOA4P06727 396 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 LTA4HP09960 611 aaKnown RBP11.24□□□□□ -0.61
SLIRP-212ENST00000613856 DHRS4L1P0CG22 281 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 MYCLP1P12525 358 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-212ENST00000613856 CHN1P15882 459 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 CHRM3P20309 590 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 MAT2AP31153 395 aaKnown RBP11.24□□□□□ -0.61
SLIRP-212ENST00000613856 AKT2P31751 481 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 KIAA1024LP59773 190 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 TMEM115Q12893 351 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-212ENST00000613856 GTF2H3Q13889 308 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 FAM83EQ2M2I3 478 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 CCDC153Q494R4 210 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 AGAP9Q5VTM2 703 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 TMEM207Q6UWW9 146 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 NKAPQ8N5F7 415 aaKnown RBP11.24□□□□□ -0.61
SLIRP-212ENST00000613856 RASGEF1AQ8N9B8 481 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 GIMAP7Q8NHV1 300 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 KCTD4Q8WVF5 259 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 INPP5DQ92835 1189 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 KLK6Q92876 244 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 GPR78Q96P69 363 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 C6orf106Q9H6K1 298 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-212ENST00000613856 IGSF5Q9NSI5 407 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 SPATS2LQ9NUQ6 558 aaKnown RBP11.24□□□□□ -0.61
SLIRP-212ENST00000613856 EMCNQ9ULC0 261 aa11.24□□□□□ -0.61
SLIRP-212ENST00000613856 ZFC3H1O60293 1989 aaKnown RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 IQCF5A8MTL0 148 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 FPGTO14772 594 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 CHUKO15111 745 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 KPNA5O15131 536 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 POLR3GO15318 223 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 SLC31A1O15431 190 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 PLIN3O60664 434 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 CDK14O94921 469 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 ASMTLO95671 621 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 TSPAN12O95859 305 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 PROCP04070 461 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 CCDC166P0CW27 439 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms