RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 ANKRD34CP0C6C1 535 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 CD151P48509 253 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 VPS41P49754 854 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 GPS1Q13098 491 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 PPP1R7Q15435 360 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 CASC4Q6P4E1 433 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 PACS1Q6VY07 963 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 SDCCAG8Q86SQ7 713 aaPredicted RBP12.06□□□□□ -0.48
CBWD1-221ENST00000613355 HOOK3Q86VS8 718 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 PIP4P2Q8N4L2 257 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 IL22RA1Q8N6P7 574 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 GABPB2Q8TAK5 448 aaPredicted RBP12.06□□□□□ -0.48
CBWD1-221ENST00000613355 ACTRT1Q8TDG2 376 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 ELMO1Q92556 727 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 C9orf72Q96LT7 481 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 FERD3LQ96RJ6 166 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 CCNL2Q96S94 520 aaPredicted RBP12.06□□□□□ -0.48
CBWD1-221ENST00000613355 OSBPL9Q96SU4 736 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 CD180Q99467 661 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 AP1M1Q9BXS5 423 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 RAB33BQ9H082 229 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 COG4Q9H9E3 785 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 PDP2Q9P2J9 529 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 WDR37Q9Y2I8 494 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 PCDHGA3Q9Y5H0 932 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 FRYQ5TBA9 3013 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 SPEGQ15772 3267 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 KIF26BQ2KJY2 2108 aa12.06□□□□□ -0.48
CBWD1-221ENST00000613355 IGLV3-16A0A075B6K0 115 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 A0A1W2PNU3 283 aaPredicted RBP12.05□□□□□ -0.48
CBWD1-221ENST00000613355 UBA6A0AVT1 1052 aaPredicted RBP12.05□□□□□ -0.48
CBWD1-221ENST00000613355 PRR19A6NJB7 356 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 POLR1CO15160 346 aaPredicted RBP12.05□□□□□ -0.48
CBWD1-221ENST00000613355 PHF2O75151 1096 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 GOT2P00505 430 aaKnown RBP12.05□□□□□ -0.48
CBWD1-221ENST00000613355 CCL4P13236 92 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 FNTAP49354 379 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 FOXM1Q08050 763 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 VAC14Q08AM6 782 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 PDAP1Q13442 181 aaKnown RBP12.05□□□□□ -0.48
CBWD1-221ENST00000613355 TMED2Q15363 201 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 DBN1Q16643 649 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 CACHD1Q5VU97 1274 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 MRNIPQ6NTE8 343 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 LRRC8BQ6P9F7 803 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 FAM83HQ6ZRV2 1179 aaPredicted RBP12.05□□□□□ -0.48
CBWD1-221ENST00000613355 PRUNE1Q86TP1 453 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 REXO1L1PQ8IX06 675 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 MPP5Q8N3R9 675 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 PRELID2Q8N945 189 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 ACVR1CQ8NER5 493 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 UBXN4Q92575 508 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 KIAA1143Q96AT1 154 aaPredicted RBP12.05□□□□□ -0.48
CBWD1-221ENST00000613355 SGSM3Q96HU1 749 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 RUNDC3BQ96NL0 473 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 PANX3Q96QZ0 392 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 EFHD1Q9BUP0 239 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 TRIT1Q9H3H1 467 aaKnown RBP12.05□□□□□ -0.48
CBWD1-221ENST00000613355 MVB12BQ9H7P6 319 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 TMEM9Q9P0T7 183 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 SNX12Q9UMY4 172 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 CFAP20Q9Y6A4 193 aaKnown RBP12.05□□□□□ -0.48
CBWD1-221ENST00000613355 EPG5Q9HCE0 2579 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 USP24Q9UPU5 2620 aa12.05□□□□□ -0.48
CBWD1-221ENST00000613355 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 MAGEB16A2A368 324 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 PMS2P1A4D2B8 440 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 KPNA5O15131 536 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 NDUFS3O75489 264 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 C9P02748 559 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 RPN2P04844 631 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 APOA4P06727 396 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 FGF3P11487 239 aaPredicted RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 PSMA3P25788 255 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 FOXN2P32314 431 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 COILP38432 576 aaPredicted RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 ETV5P41161 510 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 GRIA1P42261 906 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 PAFAH1B1P43034 410 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 CDKN1CP49918 316 aaPredicted RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 TERF1P54274 439 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 GNG11P61952 73 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 MC2RQ01718 297 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 BOP1Q14137 746 aaKnown RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 TRIP13Q15645 432 aaPredicted RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 DNTTIP2Q5QJE6 756 aaKnown RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 TMTC4Q5T4D3 741 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 RNF187Q5TA31 235 aaPredicted RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 PTRHD1Q6GMV3 140 aaKnown RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 ARHGAP22Q7Z5H3 698 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 PCGF5Q86SE9 256 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 KMT5CQ86Y97 462 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 CARFQ8N187 725 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 CLDN19Q8N6F1 224 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 GLIS1Q8NBF1 620 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 OR13J1Q8NGT2 312 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 LCN9Q8WX39 176 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 MS4A14Q96JA4 679 aa12.04□□□□□ -0.48
CBWD1-221ENST00000613355 UBL7Q96S82 380 aaPredicted RBP12.04□□□□□ -0.48
CBWD1-221ENST00000613355 INSM2Q96T92 566 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms