RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 NKX6-1P78426 367 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 FCRL4Q96PJ5 515 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 GCATO75600 419 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 TRUB2O95900 331 aaKnown RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 NDUFB10O96000 172 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 FGFR1P11362 822 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 HOXD8P13378 290 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 PON2Q15165 354 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 CBWD6Q4V339 395 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 EARS2Q5JPH6 523 aaKnown RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 TLDC1Q6P9B6 456 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 CCDC24Q8N4L8 307 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MAF1Q9H063 256 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MGAT4BQ9UQ53 548 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MBL2P11226 248 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 MIPP30301 263 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 PPP2R2BQ00005 443 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 SRSF11Q05519 484 aaKnown RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 DSG2Q14126 1118 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MEDAGQ5VYS4 303 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 AMIGO1Q86WK6 493 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 ZNF606Q8WXB4 792 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 SGCDQ92629 289 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 LENG8Q96PV6 779 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 SMAD5Q99717 465 aaKnown RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 ZDHHC7Q9NXF8 308 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 ARL15Q9NXU5 204 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MITFO75030 526 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 OR6A2O95222 327 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 PGLSO95336 258 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 GPR1P46091 355 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 NTRK3Q16288 839 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 AKR1C8PQ5T2L2 129 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 GJB7Q6PEY0 223 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 PRICKLE1Q96MT3 831 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 AGAP2Q99490 1192 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 TAS2R8Q9NYW2 309 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 AP1M2Q9Y6Q5 423 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 NUDT19A8MXV4 375 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 WNT7AO00755 349 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 RAB4AP20338 218 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 GK2Q14410 553 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 IDO2Q6ZQW0 420 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 ILDR2Q71H61 639 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 ANGPTL6Q8NI99 470 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 C3orf49Q96BT1 292 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 PCDHGB5Q9Y5G0 923 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 USP31Q70CQ4 1352 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 PCM1Q15154 2024 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 POLR1CO15160 346 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 RDH16O75452 317 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 BAG6P46379 1132 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 POLR2LP62875 67 aaKnown RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 HEPACAMQ14CZ8 416 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 PLA2G4EQ3MJ16 856 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MPZL3Q6UWV2 235 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 USP45Q70EL2 814 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 ILDR1Q86SU0 546 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 RANBP3LQ86VV4 465 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 ZNF227Q86WZ6 799 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 FATE1Q969F0 183 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MRI1Q9BV20 369 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 AGAP5A6NIR3 686 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 CHRNB1P11230 501 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 AGMOQ6ZNB7 445 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 LINGO2Q7L985 606 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 SSX6Q7RTT6 188 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ITIH5Q86UX2 942 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 CARM1Q86X55 608 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 HID1Q8IV36 788 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ZNF781Q8N8C0 355 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 GEMIN6Q8WXD5 167 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 HEBP1Q9NRV9 189 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 EI24O14681 340 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 CRKLP46109 303 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 NDUFAF5Q5TEU4 345 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 PPP2R2DQ66LE6 453 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ZPBP2Q6X784 338 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 TMEM161BQ8NDZ6 487 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 HEPHQ9BQS7 1158 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 PTPRUQ92729 1446 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 HSBP1L1C9JCN9 74 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 INTS7Q9NVH2 962 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 UPK1BO75841 260 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 E2F1Q01094 437 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 GRB14Q14449 540 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 ELMO3Q96BJ8 720 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 CDC6Q99741 560 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 DPYSL5Q9BPU6 564 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 NT5MQ9NPB1 228 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 MAN1C1Q9NR34 630 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 FAM208AQ9UK61 1670 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 C10orf71Q711Q0 1435 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 F5H6K3 240 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 CXCR6O00574 342 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 INPPL1O15357 1258 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 CATP04040 527 aaKnown RBP8.66□□□□□ -1.02
TTC28-208ENST00000612946 GKN3PP0CG01 181 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 TRAPPC2P0DI81 140 aa8.66□□□□□ -1.02
TTC28-208ENST00000612946 TRAPPC2BP0DI82 140 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms