RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SLC35G4P0C7Q5 338 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF23P17027 643 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 DDX5P17844 614 aaKnown RBP10.71□□□□□ -0.7
FAM3A-221ENST00000612856 IL10P22301 178 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 MAOBP27338 520 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 CD70P32970 193 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 ACTR1BP42025 376 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 IDH3AP50213 366 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 ACTR1AP61163 376 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 HNRNPDQ14103 355 aaKnown RBP10.71□□□□□ -0.7
FAM3A-221ENST00000612856 PTPRRQ15256 657 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 CLEC4FQ8N1N0 589 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 CMASQ8NFW8 434 aaPredicted RBP10.71□□□□□ -0.7
FAM3A-221ENST00000612856 LINC01599Q8WXQ3 324 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 PPP1R2P1Q96PQ5 205 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 FERD3LQ96RJ6 166 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 TSPAN18Q96SJ8 248 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 PRKD2Q9BZL6 878 aa10.71□□□□□ -0.7
FAM3A-221ENST00000612856 ZCCHC2Q9C0B9 1178 aaKnown RBP10.71□□□□□ -0.7
FAM3A-221ENST00000612856 CARNS1A5YM72 827 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 CLASP2O75122 1294 aaKnown RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 GABBR2O75899 941 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 KLF8O95600 359 aaPredicted RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 EFNA1P20827 205 aaPredicted RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 PIK3R1P27986 724 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 LMAN2Q12907 356 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 DPYSL2Q16555 572 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF829Q3KNS6 432 aaPredicted RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 PAGE2BQ5JRK9 111 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 PIK3R6Q5UE93 754 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 CRTC1Q6UUV9 634 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ENPP7Q6UWV6 458 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 RNF111Q6ZNA4 994 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 DCDC5Q6ZRR9 648 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 TPRG1Q6ZUI0 275 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 CLIP4Q8N3C7 705 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SLC35B2Q8TB61 432 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ACTRT2Q8TDY3 377 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 UHRF1Q96T88 793 aaPredicted RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SEPHS2Q99611 448 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 C20orf27Q9GZN8 174 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 POMKQ9H5K3 350 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 EGFL7Q9UHF1 273 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 KCNK6Q9Y257 313 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 CARD8Q9Y2G2 431 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 DYRK1BQ9Y463 629 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ADAM23O75077 832 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 LRATO95237 230 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 CATP04040 527 aaKnown RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 PGFP49763 221 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 DGCR6Q14129 220 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 TCEAL1Q15170 157 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 HIST2H2ACQ16777 129 aaPredicted RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 AGKQ53H12 422 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 HIST2H2AA3Q6FI13 130 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SLCO2A1Q92959 643 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 OMA1Q96E52 524 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SMOC2Q9H3U7 446 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ELAC1Q9H777 363 aaKnown RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 EML4Q9HC35 981 aaKnown RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF334Q9HCZ1 680 aaPredicted RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SPHK2Q9NRA0 654 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ELOVL2Q9NXB9 296 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ITM2BQ9Y287 266 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 LAMA2P24043 3122 aaKnown RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF646O15015 1829 aaPredicted RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 KAT7O95251 611 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 FKBP9O95302 570 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 C2P06681 752 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 TNNI3P19429 210 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 GRK3P35626 688 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ITPRIPL2Q3MIP1 535 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 TRAF7Q6Q0C0 670 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 TMEM220Q6QAJ8 160 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 FKBP9P1Q75LS8 142 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 MRPL10Q7Z7H8 261 aaKnown RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ZC3H7AQ8IWR0 971 aaKnown RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 FAM46DQ8NEK8 389 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 CLHC1Q8NHS4 586 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SMARCD2Q92925 531 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF778Q96MU6 729 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 C1QTNF7Q9BXJ2 289 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 FRMD8P1Q9BZ68 369 aaPredicted RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SUV39H2Q9H5I1 410 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SOX17Q9H6I2 414 aaPredicted RBP10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SIAEQ9HAT2 523 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 STK39Q9UEW8 545 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 TBX21Q9UL17 535 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 SATB2Q9UPW6 733 aa10.7□□□□□ -0.7
FAM3A-221ENST00000612856 PCP4L1A6NKN8 68 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ASNA1O43681 348 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 PRNPP04156 253 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 FGF1P05230 155 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF8P17098 575 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 RAB33AQ14088 237 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 DHCR24Q15392 516 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SEL1L3Q68CR1 1132 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 CBR4Q8N4T8 237 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 NPWQ8N729 165 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms