RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GFRA2O00451 464 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 EEDO75530 441 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZNF7P17097 686 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 PPP1R8Q12972 351 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 RAB33AQ14088 237 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZXDCQ2QGD7 858 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 GTDC1Q4AE62 458 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 NHSL2Q5HYW2 709 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 TBPL2Q6SJ96 375 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 CARM1Q86X55 608 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 AHI1Q8N157 1196 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 PYCR2Q96C36 320 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 NUSAP1Q9BXS6 441 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 BRINP2Q9C0B6 783 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 IKZF5Q9H5V7 419 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 MRPL17Q9NRX2 175 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 OLAHQ9NV23 265 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 DDX18Q9NVP1 670 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 WWOXQ9NZC7 414 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 NUDT4Q9NZJ9 180 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ACTR3BQ9P1U1 418 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 SUN2Q9UH99 717 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLCO3A1Q9UIG8 710 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 UTS2RQ9UKP6 389 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 DNAH14Q0VDD8 3507 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 TCRBV5S2A0A599 114 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 TYW5A2RUC4 315 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 UPK3BL1B0FP48 263 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 UPK3BL2E5RIL1 263 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 PFDN6O15212 129 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 DFNA5O60443 496 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 C1QCP02747 245 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 LHCGRP22888 699 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 PCSK6P29122 969 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 HMOX2P30519 316 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 RPL5P46777 297 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ARHGEF7Q14155 803 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 POM121L1PQ3SYA9 428 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 TPGS2Q68CL5 300 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 LRRC66Q68CR7 880 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ASTLQ6HA08 431 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 LCN8Q6JVE9 175 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 FIBCD1Q8N539 461 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 FAM86B1Q8N7N1 296 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 PHF12Q96QT6 1004 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 MTG2Q9H4K7 406 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 AGPAT4Q9NRZ5 378 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ARMC1Q9NVT9 282 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 HACD3Q9P035 362 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ST14Q9Y5Y6 855 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 RNF103-CHMP3A0A140T963 221 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 LOC730098B7Z3J9 87 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 EI24O14681 340 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 TGM5O43548 720 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 PSMA4P25789 261 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ACRV1P26436 265 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 NEK2P51955 445 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 APOFQ13790 326 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 PLEKHG6Q3KR16 790 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ATP13A5Q4VNC0 1218 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZNF648Q5T619 568 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 KRT80Q6KB66 452 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 CRTC1Q6UUV9 634 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 DLEU7Q6UYE1 221 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLC39A5Q6ZMH5 540 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 SNX20Q7Z614 316 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZFAND4Q86XD8 727 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 SKA2Q8WVK7 121 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 DUS3LQ96G46 650 aaKnown RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 EFHD1Q9BUP0 239 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 C2orf49Q9BVC5 232 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZNF696Q9H7X3 374 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 MRGBPQ9NV56 204 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 LEF1Q9UJU2 399 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 NEUROG3Q9Y4Z2 214 aa13.84□□□□□ -0.19
PCDHGA3-202ENST00000612467 SCN8AQ9UQD0 1980 aa13.83□□□□□ -0.19
PCDHGA3-202ENST00000612467 KLHL33A6NCF5 533 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 HLA-FP30511 346 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 CCR2P41597 374 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 RPL26P61254 145 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 B4GALNT1Q00973 533 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ROR2Q01974 943 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 RETSATQ6NUM9 610 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ADAMTSL2Q86TH1 951 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 VRK3Q8IV63 474 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZBTB2Q8N680 514 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ANKFN1Q8N957 763 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 CHST14Q8NCH0 376 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ST13P5Q8NFI4 369 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 OR10Q1Q8NGQ4 319 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 CYGBQ8WWM9 190 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZUFSPQ96AP4 578 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 BIRC7Q96CA5 298 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 MPP4Q96JB8 637 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZDHHC6Q9H6R6 413 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 CARS2Q9HA77 564 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 LTB4R2Q9NPC1 389 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 SLC6A13Q9NSD5 602 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 RIC8BQ9NVN3 520 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 VAPAQ9P0L0 249 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms