RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ST14Q9Y5Y6 855 aa13.85□□□□□ -0.19
COL6A1-207ENST00000612273 K7ERQ8 282 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 NBNO60934 754 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 MITFO75030 526 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 RHOCP08134 193 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 TPP2P29144 1249 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 CA5AP35218 305 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 SLC26A3P40879 764 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 NEK2P51955 445 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 VAC14Q08AM6 782 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 NFATC3Q12968 1075 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 AFTPHQ6ULP2 937 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 CNIH3Q8TBE1 160 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 ACTL8Q9H568 366 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 INTS10Q9NVR2 710 aaKnown RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 PCDHB3Q9Y5E6 796 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 DUSP11O75319 330 aaKnown RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 EEDO75530 441 aaKnown RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 MLYCDO95822 493 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 TSPAN12O95859 305 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 ANXA6P08133 673 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 ZNF140P52738 457 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 ARHGEF7Q14155 803 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 GPR162Q16538 588 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 RNF219Q5W0B1 726 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 ANKRD26P1Q6NSI1 321 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 DET1Q7L5Y6 550 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 GOLGA7Q7Z5G4 137 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 SPATA19Q7Z5L4 167 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 MRPL10Q7Z7H8 261 aaKnown RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 ACDQ96AP0 544 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 TSSK3Q96PN8 268 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 EPS8L2Q9H6S3 715 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 SLC6A13Q9NSD5 602 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 NLE1Q9NVX2 485 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 TRNAU1APQ9NX07 287 aaKnown RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 RALGAPA2Q2PPJ7 1873 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 AXIN1O15169 862 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 ZNF682O95780 498 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 FTH1P02794 183 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 KCNAB2Q13303 367 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 MAPK11Q15759 364 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 MAPKAPK3Q16644 382 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 LRRC73Q5JTD7 316 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 SULT1C3Q6IMI6 304 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 DLEU7Q6UYE1 221 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 NKAPQ8N5F7 415 aaKnown RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 PACRGLQ8N7B6 248 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 PNPT1Q8TCS8 783 aaKnown RBP13.84□□□□□ -0.19
COL6A1-207ENST00000612273 WBP2Q969T9 261 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 PYCR2Q96C36 320 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 ULK4Q96C45 1275 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 PCDHB8Q9UN66 801 aa13.84□□□□□ -0.19
COL6A1-207ENST00000612273 UNC80Q8N2C7 3258 aa13.83□□□□□ -0.19
COL6A1-207ENST00000612273 FAM234BA2RU67 622 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 WASH4PA8MWX3 477 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF623O75123 536 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 INMTO95050 263 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 OGNP20774 298 aaKnown RBP13.83□□□□□ -0.2
COL6A1-207ENST00000612273 IL5RAQ01344 420 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 DAG1Q14118 895 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 CARTPTQ16568 116 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 CYP2A13Q16696 494 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 PHKG1Q16816 387 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 TMEM173Q86WV6 379 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-207ENST00000612273 C8orf59Q8N0T1 100 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-207ENST00000612273 C10orf111Q8N326 155 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 RNF175Q8N4F7 328 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 CARNMT1Q8N4J0 409 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 TMCO5AQ8N6Q1 288 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 TRIB2Q92519 343 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 CSF3RQ99062 836 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 RHNO1Q9BSD3 238 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 WWOXQ9NZC7 414 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 GLTPD2A6NH11 291 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 ANKRD66B4E2M5 251 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 ADAM12O43184 909 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 HTR7P34969 479 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 FAM189BP81408 668 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 EMX2Q04743 252 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 GTF2H2Q13888 395 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 PGS1Q32NB8 556 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 GTF2H2CQ6P1K8 395 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 TAS1R1Q7RTX1 841 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 RBM23Q86U06 439 aaKnown RBP13.83□□□□□ -0.2
COL6A1-207ENST00000612273 ZFAND4Q86XD8 727 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 RASAL3Q86YV0 1011 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 LKAAEAR1Q8TD35 194 aa13.83□□□□□ -0.2
COL6A1-207ENST00000612273 H0Y858 1186 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 CAPN15O75808 1086 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 ENO2P09104 434 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-207ENST00000612273 FMO3P31513 532 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 RAD23AP54725 363 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 EGFLAMQ63HQ2 1017 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 CENPSQ8N2Z9 138 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 LIX1Q8N485 282 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 SLC22A17Q8WUG5 538 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 DPY30Q9C005 99 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 ACTR8Q9H981 624 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 COMMD8Q9NX08 183 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms