RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 MATN2O00339 956 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 CAPN5O15484 640 aaPredicted RBP12.06□□□□□ -0.48
CBWD3-208ENST00000612050 PRAMEF10O60809 474 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 ANKRD34CP0C6C1 535 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 CD151P48509 253 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 VPS41P49754 854 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 GPS1Q13098 491 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 PPP1R7Q15435 360 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 CASC4Q6P4E1 433 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 PACS1Q6VY07 963 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 SDCCAG8Q86SQ7 713 aaPredicted RBP12.06□□□□□ -0.48
CBWD3-208ENST00000612050 HOOK3Q86VS8 718 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 IL22RA1Q8N6P7 574 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 GABPB2Q8TAK5 448 aaPredicted RBP12.06□□□□□ -0.48
CBWD3-208ENST00000612050 ACTRT1Q8TDG2 376 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 ELMO1Q92556 727 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 C9orf72Q96LT7 481 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 FERD3LQ96RJ6 166 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 CCNL2Q96S94 520 aaPredicted RBP12.06□□□□□ -0.48
CBWD3-208ENST00000612050 OSBPL9Q96SU4 736 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 CD180Q99467 661 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 AP1M1Q9BXS5 423 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 RAB33BQ9H082 229 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 COG4Q9H9E3 785 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 PDP2Q9P2J9 529 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 WDR37Q9Y2I8 494 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 PCDHGA3Q9Y5H0 932 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 FRYQ5TBA9 3013 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 SPEGQ15772 3267 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 KIF26BQ2KJY2 2108 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 IGLV3-16A0A075B6K0 115 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 A0A1W2PNU3 283 aaPredicted RBP12.05□□□□□ -0.48
CBWD3-208ENST00000612050 UBA6A0AVT1 1052 aaPredicted RBP12.05□□□□□ -0.48
CBWD3-208ENST00000612050 PRR19A6NJB7 356 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 POLR1CO15160 346 aaPredicted RBP12.05□□□□□ -0.48
CBWD3-208ENST00000612050 PHF2O75151 1096 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 GOT2P00505 430 aaKnown RBP12.05□□□□□ -0.48
CBWD3-208ENST00000612050 CCL4P13236 92 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 FNTAP49354 379 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 FOXM1Q08050 763 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 VAC14Q08AM6 782 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 TMED2Q15363 201 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 DBN1Q16643 649 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 CACHD1Q5VU97 1274 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 MRNIPQ6NTE8 343 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 LRRC8BQ6P9F7 803 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 FAM83HQ6ZRV2 1179 aaPredicted RBP12.05□□□□□ -0.48
CBWD3-208ENST00000612050 PRUNE1Q86TP1 453 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 REXO1L1PQ8IX06 675 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 MPP5Q8N3R9 675 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 PRELID2Q8N945 189 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 ACVR1CQ8NER5 493 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 UBXN4Q92575 508 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 KIAA1143Q96AT1 154 aaPredicted RBP12.05□□□□□ -0.48
CBWD3-208ENST00000612050 SGSM3Q96HU1 749 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 RUNDC3BQ96NL0 473 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 PANX3Q96QZ0 392 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 EFHD1Q9BUP0 239 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 TRIT1Q9H3H1 467 aaKnown RBP12.05□□□□□ -0.48
CBWD3-208ENST00000612050 MVB12BQ9H7P6 319 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 TMEM9Q9P0T7 183 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 SNX12Q9UMY4 172 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 CFAP20Q9Y6A4 193 aaKnown RBP12.05□□□□□ -0.48
CBWD3-208ENST00000612050 EPG5Q9HCE0 2579 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 USP24Q9UPU5 2620 aa12.05□□□□□ -0.48
CBWD3-208ENST00000612050 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 MAGEB16A2A368 324 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 PMS2P1A4D2B8 440 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 KPNA5O15131 536 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 NDUFS3O75489 264 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 C9P02748 559 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 RPN2P04844 631 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 APOA4P06727 396 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 FGF3P11487 239 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 PSMA3P25788 255 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 FOXN2P32314 431 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 COILP38432 576 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 ETV5P41161 510 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 GRIA1P42261 906 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 PAFAH1B1P43034 410 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 CDKN1CP49918 316 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 TERF1P54274 439 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 GNG11P61952 73 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 MC2RQ01718 297 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 BOP1Q14137 746 aaKnown RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 TRIP13Q15645 432 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 DNTTIP2Q5QJE6 756 aaKnown RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 TMTC4Q5T4D3 741 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 RNF187Q5TA31 235 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 PTRHD1Q6GMV3 140 aaKnown RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 ARHGAP22Q7Z5H3 698 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 PCGF5Q86SE9 256 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 KMT5CQ86Y97 462 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 CARFQ8N187 725 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 CLDN19Q8N6F1 224 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 GLIS1Q8NBF1 620 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 OR13J1Q8NGT2 312 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 LCN9Q8WX39 176 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 MS4A14Q96JA4 679 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 UBL7Q96S82 380 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms