RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 RDH14Q9HBH5 336 aa12.08□□□□□ -0.48
CBWD1-220ENST00000612045 PREBQ9HCU5 417 aa12.08□□□□□ -0.48
CBWD1-220ENST00000612045 MBNL1Q9NR56 388 aaKnown RBP12.08□□□□□ -0.48
CBWD1-220ENST00000612045 VTI1BQ9UEU0 232 aa12.08□□□□□ -0.48
CBWD1-220ENST00000612045 CA14Q9ULX7 337 aa12.08□□□□□ -0.48
CBWD1-220ENST00000612045 NCKAP1Q9Y2A7 1128 aa12.08□□□□□ -0.48
CBWD1-220ENST00000612045 TCRBV21S2A2A0A5A6 115 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 HDAC3O15379 428 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 GRID2O43424 1007 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 VEGFDO43915 354 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 RNGTTO60942 597 aaKnown RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 UBOX5O94941 541 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SLCO2B1O94956 709 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 S100BP04271 92 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 VCLP18206 1134 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TSPAN8P19075 237 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 NAA20P61599 178 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 CDK3Q00526 305 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SFSWAPQ12872 951 aaKnown RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SGCGQ13326 291 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 GTF2H3Q13889 308 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 IRF4Q15306 451 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 PHKG1Q16816 387 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SPRED3Q2MJR0 410 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SYTL3Q4VX76 610 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 LACTB2Q53H82 288 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 EPGNQ6UW88 154 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 KIAA1324Q6UXG2 1013 aaKnown RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 NEK10Q6ZWH5 1172 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 HORMAD1Q86X24 394 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TRAPPC5Q8IUR0 188 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TP53I13Q8NBR0 393 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SKA2Q8WVK7 121 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 KLK6Q92876 244 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 ZNF514Q96K75 400 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 RILPQ96NA2 401 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 NSUN5Q96P11 429 aaKnown RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 ASB2Q96Q27 587 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SLC17A9Q9BYT1 436 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TNFRSF12AQ9NP84 129 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 FAM8A1Q9UBU6 413 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 ZFP69BQ9UJL9 534 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 PCTPQ9UKL6 214 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 DOCK9Q9BZ29 2069 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3DA0A087WVF3 549 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3IA0A087WXS9 549 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3EA0A087X179 549 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3KA0A087X1G2 549 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SLC5A10A0PJK1 596 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3FA6NER0 549 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TMEM233B4DJY2 109 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3LB9A6J9 549 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 PPP6CO00743 305 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 DIAPH2O60879 1101 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 GUCA1CO95843 209 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 C8GP07360 202 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3HP0C7X1 549 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 CHRNB1P11230 501 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 ZNF8P17098 575 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TEAD1P28347 426 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 CLCQ05315 142 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 LCP2Q13094 533 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TUBB3Q13509 450 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 INPP5AQ14642 412 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 MAP7D1Q3KQU3 841 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SLC9B1Q4ZJI4 515 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3GQ6DHY5 549 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3CQ6IPX1 549 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 NEK5Q6P3R8 708 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 Q6ZS52 159 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 UBE2R2Q712K3 238 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 CLNKQ7Z7G1 428 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 FAM124AQ86V42 546 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 ZNF547Q8IVP9 402 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TBC1D3Q8IZP1 549 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 ZNF687Q8N1G0 1237 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 MAPK15Q8TD08 544 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TRPC4APQ8TEL6 797 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 ZNF483Q8TF39 744 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 ASB11Q8WXH4 323 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TMEM159Q96B96 161 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 LINC00615Q96LM1 132 aaPredicted RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 LGR4Q9BXB1 951 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 SLC12A9Q9BXP2 914 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 GULP1Q9UBP9 304 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 PTBP2Q9UKA9 531 aaKnown RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 GPR34Q9UPC5 381 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 APOBEC2Q9Y235 224 aaKnown RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TMEM98Q9Y2Y6 226 aa12.07□□□□□ -0.48
CBWD1-220ENST00000612045 TNPO3Q9Y5L0 923 aaKnown RBP12.07□□□□□ -0.48
CBWD1-220ENST00000612045 ANKRD65E5RJM6 399 aa12.06□□□□□ -0.48
CBWD1-220ENST00000612045 GFYI3L273 518 aa12.06□□□□□ -0.48
CBWD1-220ENST00000612045 E2F3O00716 465 aa12.06□□□□□ -0.48
CBWD1-220ENST00000612045 ENO2P09104 434 aaPredicted RBP12.06□□□□□ -0.48
CBWD1-220ENST00000612045 GABRG2P18507 467 aa12.06□□□□□ -0.48
CBWD1-220ENST00000612045 PBLDP30039 288 aaPredicted RBP12.06□□□□□ -0.48
CBWD1-220ENST00000612045 TRIM23P36406 574 aa12.06□□□□□ -0.48
CBWD1-220ENST00000612045 RPIAP49247 311 aa12.06□□□□□ -0.48
CBWD1-220ENST00000612045 SH3BP2P78314 561 aa12.06□□□□□ -0.48
CBWD1-220ENST00000612045 PRKCQQ04759 706 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms