RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 BDH2Q9BUT1 245 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 TM6SF2Q9BZW4 377 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 NSUN3Q9H649 340 aaKnown RBP16.96■□□□□ 0.31
NEK3-206ENST00000611833 CD320Q9NPF0 282 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 TIMMDC1Q9NPL8 285 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 MAGEL2Q9UJ55 1249 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 ANGPTL3Q9Y5C1 460 aa16.96■□□□□ 0.31
NEK3-206ENST00000611833 ZFC3H1O60293 1989 aaKnown RBP16.96■□□□□ 0.31
NEK3-206ENST00000611833 GRXCR2A6NFK2 248 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 K7ERQ8 282 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 HSPA7P48741 367 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 DGKQP52824 942 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 CCL23P55773 120 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 MTPNP58546 118 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 PLIN5Q00G26 463 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 DLEU7Q6UYE1 221 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.96■□□□□ 0.3
NEK3-206ENST00000611833 PRR23BQ6ZRT6 265 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 TMEM150AQ86TG1 271 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 OR6K2Q8NGY2 324 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 BHMTQ93088 406 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 TRMT2BQ96GJ1 504 aaKnown RBP16.96■□□□□ 0.3
NEK3-206ENST00000611833 EGFL8Q99944 293 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 ASB8Q9H765 288 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 PCDHB3Q9Y5E6 796 aa16.96■□□□□ 0.3
NEK3-206ENST00000611833 PLXNA4Q9HCM2 1894 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 PGLSO95336 258 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 TRIM16O95361 564 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 SLC2A4P14672 509 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 CA5AP35218 305 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 CAPGP40121 348 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 CSKP41240 450 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 ZXDBP98169 803 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 RFTN2Q52LD8 501 aaPredicted RBP16.95■□□□□ 0.3
NEK3-206ENST00000611833 ERI1Q8IV48 349 aaKnown RBP16.95■□□□□ 0.3
NEK3-206ENST00000611833 ISG20Q96AZ6 181 aaKnown RBP16.95■□□□□ 0.3
NEK3-206ENST00000611833 ALG14Q96F25 216 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 CGREF1Q99674 301 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 BOCQ9BWV1 1114 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 APOL5Q9BWW9 433 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 FAM126AQ9BYI3 521 aaPredicted RBP16.95■□□□□ 0.3
NEK3-206ENST00000611833 GNPTGQ9UJJ9 305 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 ST14Q9Y5Y6 855 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 ARNTLO00327 626 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 IFRD1O00458 451 aaPredicted RBP16.95■□□□□ 0.3
NEK3-206ENST00000611833 PQBP1O60828 265 aaKnown RBP16.95■□□□□ 0.3
NEK3-206ENST00000611833 GMNNO75496 209 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 BIRC2Q13490 618 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 CDH18Q13634 790 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 ABRAXAS1Q6UWZ7 409 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 OFCC1Q8IZS5 231 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 RBFAQ8N0V3 343 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 ADAMTS19Q8TE59 1207 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 NUDT8Q8WV74 236 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 PIH1D2Q8WWB5 315 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 PPP3R2Q96LZ3 170 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 ACTL8Q9H568 366 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 ZFYVE1Q9HBF4 777 aa16.95■□□□□ 0.3
NEK3-206ENST00000611833 C1orf232A0A0U1RR37 186 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 GAPDHSO14556 408 aaPredicted RBP16.94■□□□□ 0.3
NEK3-206ENST00000611833 GREM1O60565 184 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 SLC25A14O95258 325 aaPredicted RBP16.94■□□□□ 0.3
NEK3-206ENST00000611833 CDH1P12830 882 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 DGKAP23743 735 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 RPS6KA3P51812 740 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 AP1S1P61966 158 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 TRAF3Q13114 568 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 PWP1Q13610 501 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 SELPLGQ14242 412 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 VEPH1Q14D04 833 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 AAK1Q2M2I8 961 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 DEFB128Q7Z7B8 93 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 CLDN19Q8N6F1 224 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 HJURPQ8NCD3 748 aaPredicted RBP16.94■□□□□ 0.3
NEK3-206ENST00000611833 PDPRQ8NCN5 879 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 ZBTB18Q99592 522 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 LIN28AQ9H9Z2 209 aaKnown RBP16.94■□□□□ 0.3
NEK3-206ENST00000611833 DNMT3BQ9UBC3 853 aaKnown RBP16.94■□□□□ 0.3
NEK3-206ENST00000611833 HSFX1Q9UBD0 423 aa16.94■□□□□ 0.3
NEK3-206ENST00000611833 GLUD1P00367 558 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 ITGALP20701 1170 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 RPS3P23396 243 aaKnown RBP eCLIP16.93■□□□□ 0.3
NEK3-206ENST00000611833 RPL38P63173 70 aaKnown RBP16.93■□□□□ 0.3
NEK3-206ENST00000611833 FXNQ16595 210 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 SNX20Q7Z614 316 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 DNAJB7Q7Z6W7 309 aaPredicted RBP16.93■□□□□ 0.3
NEK3-206ENST00000611833 PATL1Q86TB9 770 aaKnown RBP16.93■□□□□ 0.3
NEK3-206ENST00000611833 CLVS1Q8IUQ0 354 aaPredicted RBP16.93■□□□□ 0.3
NEK3-206ENST00000611833 CREBZFQ9NS37 354 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 ELOVL2Q9NXB9 296 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 WWOXQ9NZC7 414 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 EIF3LQ9Y262 564 aaKnown RBP16.93■□□□□ 0.3
NEK3-206ENST00000611833 OARD1Q9Y530 152 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 ANKRD33BA6NCL7 494 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 FFAR3O14843 346 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 GPR42O15529 346 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 TAPBPO15533 448 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 RGS14O43566 566 aa16.93■□□□□ 0.3
NEK3-206ENST00000611833 RSL1D1O76021 490 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms