RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, human

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSPG5-205	ENST00000610462	TCF3	P15923	654 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	POLR2E	P19388	210 aa	Known RBP	27.56	■■■□□ 2
CSPG5-205	ENST00000610462	RHD	Q02161	417 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	LRRC73	Q5JTD7	316 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	METTL2B	Q6P1Q9	378 aa	Known RBP	27.56	■■■□□ 2
CSPG5-205	ENST00000610462	SFRP1	Q8N474	314 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	FNDC5	Q8NAU1	212 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	OTUB2	Q96DC9	234 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	TEX37	Q96LM6	180 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	PKP2	Q99959	881 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	C1orf50	Q9BV19	199 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	MARK1	Q9P0L2	795 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	WNT6	Q9Y6F9	365 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	FXYD1	O00168	92 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	UFM1	P61960	85 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	UBE3A	Q05086	875 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	BRAT1	Q6PJG6	821 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	ICA1L	Q8NDH6	482 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	CATSPER1	Q8NEC5	780 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	SLC45A3	Q96JT2	553 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	ZSWIM3	Q96MP5	696 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	SLC2A11	Q9BYW1	496 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	VCX	Q9H320	206 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	PKD2L2	Q9NZM6	624 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	OPTC	Q9UBM4	332 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	ANGPTL3	Q9Y5C1	460 aa		27.56	■■■□□ 2
CSPG5-205	ENST00000610462	TCRBV3S1	A0A5B6	114 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	NME4	O00746	187 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	KATNA1	O75449	491 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	OR56A5	P0C7T3	313 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	HSPA8	P11142	646 aa	Known RBP	27.55	■■■□□ 2
CSPG5-205	ENST00000610462	CAPRIN2	Q6IMN6	1127 aa	Known RBP	27.55	■■■□□ 2
CSPG5-205	ENST00000610462	MYLIP	Q8WY64	445 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	LRRC58	Q96CX6	371 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	DUS3L	Q96G46	650 aa	Known RBP	27.55	■■■□□ 2
CSPG5-205	ENST00000610462	BTBD9	Q96Q07	612 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	HEPH	Q9BQS7	1158 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	ABCG8	Q9H221	673 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	PRKAG2	Q9UGJ0	569 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	SCOC	Q9UIL1	159 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	HCFC2	Q9Y5Z7	792 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	EIF3F	O00303	357 aa	Predicted RBP	27.55	■■■□□ 2
CSPG5-205	ENST00000610462	HMOX2	P30519	316 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	CCR7	P32248	378 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	IRS1	P35568	1242 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	ARHGEF7	Q14155	803 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	IL23R	Q5VWK5	629 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	SLC15A3	Q8IY34	581 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	NAT16	Q8N8M0	369 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	ADCY4	Q8NFM4	1077 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	HEBP1	Q9NRV9	189 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	TMPRSS11E	Q9UL52	423 aa		27.55	■■■□□ 2
CSPG5-205	ENST00000610462	STAMBP	O95630	424 aa		27.54	■■■□□ 2
CSPG5-205	ENST00000610462	CYP2A6	P11509	494 aa	Predicted RBP	27.54	■■■□□ 2
CSPG5-205	ENST00000610462	ZNF30	P17039	623 aa		27.54	■■■□□ 2
CSPG5-205	ENST00000610462	POLR2J	P52435	117 aa	Known RBP	27.54	■■■□□ 2
CSPG5-205	ENST00000610462	PSRC1	Q6PGN9	363 aa	Predicted RBP	27.54	■■■□□ 2
CSPG5-205	ENST00000610462	GRASP	Q7Z6J2	395 aa	Predicted RBP	27.54	■■■□□ 2
CSPG5-205	ENST00000610462	FRS2	Q8WU20	508 aa		27.54	■■■□□ 2
CSPG5-205	ENST00000610462	DCUN1D1	Q96GG9	259 aa		27.54	■■■□□ 2
CSPG5-205	ENST00000610462	MRGPRX3	Q96LB0	322 aa		27.54	■■■□□ 2
CSPG5-205	ENST00000610462	ZMYM5	Q9UJ78	669 aa		27.54	■■■□□ 2
CSPG5-205	ENST00000610462	AP4S1	Q9Y587	144 aa		27.54	■■■□□ 2
CSPG5-205	ENST00000610462	FAM234B	A2RU67	622 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462		K7EPI3	171 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	DNAJA2	O60884	412 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	EED	O75530	441 aa	Known RBP	27.53	■■■□□ 2
CSPG5-205	ENST00000610462	RNASEH2A	O75792	299 aa	Known RBP	27.53	■■■□□ 2
CSPG5-205	ENST00000610462	CAPNS1	P04632	268 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	PAX7	P23759	505 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	VIPR1	P32241	457 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	EMX2	Q04743	252 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	DHFR2	Q86XF0	187 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	RWDD3	Q9Y3V2	267 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	ASPDH	A6ND91	283 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	CCDC154	A6NI56	674 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	HSD17B1	P14061	328 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	MSH3	P20585	1137 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	SLC6A2	P23975	617 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	GDF5	P43026	501 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	CAPRIN1	Q14444	709 aa	Known RBP	27.53	■■■□□ 2
CSPG5-205	ENST00000610462	TICAM1	Q8IUC6	712 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	TMEM102	Q8N9M5	508 aa	Predicted RBP	27.53	■■■□□ 2
CSPG5-205	ENST00000610462	PHOSPHO2	Q8TCD6	241 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	CYB5D2	Q8WUJ1	264 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	DLGAP2	Q9P1A6	1054 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	SUN2	Q9UH99	717 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	CD84	Q9UIB8	345 aa		27.53	■■■□□ 2
CSPG5-205	ENST00000610462	LSM1	O15116	133 aa	Known RBP	27.52	■■■□□ 2
CSPG5-205	ENST00000610462	AOAH	P28039	575 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	MED21	Q13503	144 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	ABRAXAS2	Q15018	415 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	SPATS1	Q496A3	300 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	CDKL4	Q5MAI5	379 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	VPS33A	Q96AX1	596 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	TMEM106C	Q9BVX2	250 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	SPATA16	Q9BXB7	569 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	TRIM54	Q9BYV2	358 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	CMTM6	Q9NX76	183 aa		27.52	■■■□□ 2
CSPG5-205	ENST00000610462	GMPR2	Q9P2T1	348 aa	Known RBP	27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms