RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 NEURL2Q9BR09 285 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 ALOXE3Q9BYJ1 711 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 SYTL2Q9HCH5 934 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 VPS51Q9UID3 782 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 PSME2Q9UL46 239 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 UPK1AO00322 258 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 MATN4O95460 622 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 RHOQP17081 205 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 HALP42357 657 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 CASP9P55211 416 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 MOGQ16653 247 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 DHRS4L2Q6PKH6 230 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 RPL3LQ92901 407 aaKnown RBP20.11■□□□□ 0.81
SSBP3-216ENST00000610401 TFB2MQ9H5Q4 396 aaKnown RBP20.11■□□□□ 0.81
SSBP3-216ENST00000610401 ACTR8Q9H981 624 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 NBNO60934 754 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 EEDO75530 441 aaKnown RBP20.11■□□□□ 0.81
SSBP3-216ENST00000610401 PAPSS2O95340 614 aaPredicted RBP20.11■□□□□ 0.81
SSBP3-216ENST00000610401 FADS2O95864 444 aaKnown RBP20.11■□□□□ 0.81
SSBP3-216ENST00000610401 HTR1AP08908 422 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 DNAJB1P25685 340 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 IL2P60568 153 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 DPY19L1Q2PZI1 675 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 C9orf131Q5VYM1 1079 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 SLC47A1Q96FL8 570 aa20.11■□□□□ 0.81
SSBP3-216ENST00000610401 PAK1IP1Q9NWT1 392 aaPredicted RBP20.11■□□□□ 0.81
SSBP3-216ENST00000610401 PRAMEF12O95522 483 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 MLYCDO95822 493 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 SEPHS1P49903 392 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 CPT1AP50416 773 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 CPSF6Q16630 551 aaKnown RBP eCLIP20.1■□□□□ 0.81
SSBP3-216ENST00000610401 DLEU7Q6UYE1 221 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 UMODL1-AS1Q8N2C9 162 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 MS4A4AQ96JQ5 239 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 IPPKQ9H8X2 491 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 FBXO10Q9UK96 956 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 M0R3G1 203 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 KDM1AO60341 852 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 SEC22BO75396 215 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 VPS26AO75436 327 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 SERPINB7O75635 380 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 NKX2-5P52952 324 aaPredicted RBP20.1■□□□□ 0.81
SSBP3-216ENST00000610401 NCS1P62166 190 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 ZNF33AQ06730 810 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 HTRA1Q92743 480 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 CINPQ9BW66 212 aaPredicted RBP20.1■□□□□ 0.81
SSBP3-216ENST00000610401 ACTL8Q9H568 366 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 ATP13A1Q9HD20 1204 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 MRGBPQ9NV56 204 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 COMMD8Q9NX08 183 aa20.1■□□□□ 0.81
SSBP3-216ENST00000610401 BRCA1P38398 1863 aaKnown RBP20.1■□□□□ 0.81
SSBP3-216ENST00000610401 hCG_2039718K7EN88 272 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 NADKO95544 446 aaPredicted RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 ALPIP09923 528 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 NEK2P51955 445 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 ZNF135P52742 658 aaPredicted RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 EMX2Q04743 252 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 SERINC3Q13530 473 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 MAPKAPK3Q16644 382 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 C6orf141Q5SZD1 244 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 CD300LGQ6UXG3 332 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 BOCQ9BWV1 1114 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 TM6SF2Q9BZW4 377 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 KLHL25Q9H0H3 589 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 RIC8BQ9NVN3 520 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 ERVK-18Q9QC07 812 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 VCANP13611 3396 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 LOC285095A0A1B0GVY8 99 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 KRBA1A5PL33 1030 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 STX7O15400 261 aaKnown RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 WISP3O95389 354 aaPredicted RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 GKP32189 559 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 PURAQ00577 322 aaKnown RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 FAM151BQ6UXP7 276 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 NCCRP1Q6ZVX7 275 aaPredicted RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 ALDH16A1Q8IZ83 802 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 RNF175Q8N4F7 328 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 CHDHQ8NE62 594 aaPredicted RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 ZNF583Q96ND8 569 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 TSSK3Q96PN8 268 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 CDH23Q9H251 3354 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 E2F3O00716 465 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 TNPO2O14787 897 aaKnown RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 ABCB7O75027 752 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 CDH1P12830 882 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 JAK1P23458 1154 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 EPHA2P29317 976 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 NFKB2Q00653 900 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 ARMC12Q5T9G4 340 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 RAVER1Q8IY67 606 aaKnown RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 ZNF420Q8TAQ5 688 aaPredicted RBP20.09■□□□□ 0.81
SSBP3-216ENST00000610401 ABHD8Q96I13 439 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 HPS4Q9NQG7 708 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 TLR6Q9Y2C9 796 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 TRPV2Q9Y5S1 764 aa20.09■□□□□ 0.81
SSBP3-216ENST00000610401 FAM234BA2RU67 622 aa20.08■□□□□ 0.81
SSBP3-216ENST00000610401 PRSS23O95084 383 aa20.08■□□□□ 0.81
SSBP3-216ENST00000610401 SERPINA1P01009 418 aa20.08■□□□□ 0.81
SSBP3-216ENST00000610401 ZNF865P0CJ78 1059 aaPredicted RBP20.08■□□□□ 0.81
SSBP3-216ENST00000610401 RAP2AP10114 183 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms