RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ARSAP15289 507 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 LHCGRP22888 699 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 VIPR1P32241 457 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 MAD2L1Q13257 205 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-206ENST00000609853 VPS26BQ4G0F5 336 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 ATP13A5Q4VNC0 1218 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 LY6G5CQ5SRR4 150 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 LETMD1Q6P1Q0 360 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 MILR1Q7Z6M3 343 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 RAVER1Q8IY67 606 aaKnown RBP11.75□□□□□ -0.53
USP6NL-206ENST00000609853 RNF148Q8N7C7 305 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 OR52B6Q8NGF0 335 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 LKAAEAR1Q8TD35 194 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 WFIKKN2Q8TEU8 576 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 GATA6Q92908 595 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 BADQ92934 168 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 RHBDF1Q96CC6 855 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 PPP3R2Q96LZ3 170 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 MYCBPQ99417 103 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-206ENST00000609853 EGFL8Q99944 293 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 NTMT1Q9BV86 223 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 MTIF3Q9H2K0 278 aaKnown RBP11.75□□□□□ -0.53
USP6NL-206ENST00000609853 Q9H521 79 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 NSUN3Q9H649 340 aaKnown RBP11.75□□□□□ -0.53
USP6NL-206ENST00000609853 SLC52A3Q9NQ40 469 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 WWOXQ9NZC7 414 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 MAP10Q9P2G4 905 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 DKK3Q9UBP4 350 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 B4GALT6Q9UBX8 382 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 SLCO3A1Q9UIG8 710 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 LEF1Q9UJU2 399 aaPredicted RBP11.75□□□□□ -0.53
USP6NL-206ENST00000609853 FBXO10Q9UK96 956 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 PACSIN3Q9UKS6 424 aa11.75□□□□□ -0.53
USP6NL-206ENST00000609853 CNOT11Q9UKZ1 510 aaKnown RBP11.75□□□□□ -0.53
USP6NL-206ENST00000609853 C15orf38-AP3S2A0A0A6YYH1 394 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 TCRBV3S1A0A5B6 114 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 A6NHS1 94 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 VGLL3A8MV65 326 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 TAPBPO15533 448 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 BNIP3LO60238 219 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 NUAK1O60285 661 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 SYNCRIPO60506 623 aaKnown RBP11.74□□□□□ -0.53
USP6NL-206ENST00000609853 SMNDC1O75940 238 aaKnown RBP eCLIP11.74□□□□□ -0.53
USP6NL-206ENST00000609853 ANXA5P08758 320 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 C1SP09871 688 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 EBLN1P0CF75 366 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 MPC1LP0DKB6 136 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 CAPN3P20807 821 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 PEX2P28328 305 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 HMOX2P30519 316 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 SLC7A1P30825 629 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 CA5AP35218 305 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 GGT5P36269 586 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 HSPA13P48723 471 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 CLCN2P51788 898 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 SLC7A2P52569 658 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 DIO3P55073 304 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 TRAF3Q13114 568 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 PRKG2Q13237 762 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 SP140Q13342 867 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 MED21Q13503 144 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 GBX1Q14549 363 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 FBXO48Q5FWF7 155 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 PLEKHS1Q5SXH7 462 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 Q6ZVU0 165 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 NEK10Q6ZWH5 1172 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 ARPINQ7Z6K5 226 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 RETREG3Q86VR2 466 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 DHFR2Q86XF0 187 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 FNDC5Q8NAU1 212 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 OR4F6Q8NGB9 312 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 LRRC58Q96CX6 371 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 DCUN1D1Q96GG9 259 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 MAGEB10Q96LZ2 347 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-206ENST00000609853 KLHL32Q96NJ5 620 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 SLC29A3Q9BZD2 475 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 LINC00597Q9H2U6 94 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 TRPS1Q9UHF7 1281 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 RIMS3Q9UJD0 308 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 DTNAQ9Y4J8 743 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 ASB1Q9Y576 335 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 AP4S1Q9Y587 144 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 NUP210Q8TEM1 1887 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-206ENST00000609853 PABPN1LA6NDY0 278 aaKnown RBP11.74□□□□□ -0.53
USP6NL-206ENST00000609853 AQP12BA6NM10 295 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 A8MX80 341 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 H0YJX3 145 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 SLC28A1O00337 649 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 RGS14O43566 566 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 ATP1B2P14415 290 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-206ENST00000609853 EPB42P16452 691 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 ITGB6P18564 788 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 AOAHP28039 575 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 MSX2P35548 267 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-206ENST00000609853 ARL1P40616 181 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-206ENST00000609853 HSPA7P48741 367 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 HNMTP50135 292 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 POLR2JP52435 117 aaKnown RBP11.74□□□□□ -0.53
USP6NL-206ENST00000609853 SLC5A9Q2M3M2 681 aa11.74□□□□□ -0.53
USP6NL-206ENST00000609853 GRAMD1BQ3KR37 738 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms