RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PLA2G4BP0C869 781 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 MAPK4P31152 587 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 TAF6P49848 677 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 SNRPEP62304 92 aaKnown RBP3.99□□□□□ -1.77
HDDC2-207ENST00000608532 KCNC3Q14003 757 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 KRT33BQ14525 404 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 DLG2Q15700 870 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 GTDC1Q4AE62 458 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 MAATS1Q7Z4T9 603 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 GPALPP1Q8IXQ4 340 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 ZNF843Q8N446 348 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 ANKRD52Q8NB46 1076 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 DDHD1Q8NEL9 900 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 TBC1D16Q8TBP0 767 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 DAZLQ92904 295 aaKnown RBP3.99□□□□□ -1.77
HDDC2-207ENST00000608532 SLC47A1Q96FL8 570 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 MPP4Q96JB8 637 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 C1QTNF1Q9BXJ1 281 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 FGF22Q9HCT0 170 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 TAS2R14Q9NYV8 317 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 COQ3Q9NZJ6 369 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 SLC7A7Q9UM01 511 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 SPIN1Q9Y657 262 aaPredicted RBP3.99□□□□□ -1.77
HDDC2-207ENST00000608532 RUSC2Q8N2Y8 1516 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 SMCHD1A6NHR9 2005 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 SH2B2O14492 632 aaPredicted RBP3.98□□□□□ -1.77
HDDC2-207ENST00000608532 TRMUO75648 421 aaKnown RBP3.98□□□□□ -1.77
HDDC2-207ENST00000608532 HMBSP08397 361 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 CEACAM1P13688 526 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 ZNF26P17031 533 aaPredicted RBP3.98□□□□□ -1.77
HDDC2-207ENST00000608532 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 ARF3P61204 181 aaPredicted RBP3.98□□□□□ -1.77
HDDC2-207ENST00000608532 ARF1P84077 181 aaKnown RBP3.98□□□□□ -1.77
HDDC2-207ENST00000608532 GAGE2BQ13066 116 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 DDX10Q13206 875 aaKnown RBP3.98□□□□□ -1.77
HDDC2-207ENST00000608532 ITGA9Q13797 1035 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 GAGE2EQ4V326 116 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 GCNT6Q5T4J0 391 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 FAM180BQ6P0A1 224 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 CORO6Q6QEF8 472 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 RSRC2Q7L4I2 434 aaKnown RBP3.98□□□□□ -1.77
HDDC2-207ENST00000608532 GALNT5Q7Z7M9 940 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 TTC39CQ8N584 583 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 PGAM5Q96HS1 289 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 FAM81BQ96LP2 452 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 ASCL2Q99929 193 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 SMARCAD1Q9H4L7 1026 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 CHMP1AQ9HD42 196 aaPredicted RBP3.98□□□□□ -1.77
HDDC2-207ENST00000608532 GAGE2DQ9UEU5 116 aa3.98□□□□□ -1.77
HDDC2-207ENST00000608532 MED19A0JLT2 244 aaPredicted RBP3.97□□□□□ -1.77
HDDC2-207ENST00000608532 ERI2A8K979 691 aaKnown RBP3.97□□□□□ -1.77
HDDC2-207ENST00000608532 PTGES3LE9PB15 166 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 AP3D1O14617 1153 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 ITGA3P26006 1051 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 CEACAM8P31997 349 aaPredicted RBP3.97□□□□□ -1.77
HDDC2-207ENST00000608532 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 IRX1P78414 480 aaPredicted RBP3.97□□□□□ -1.77
HDDC2-207ENST00000608532 RRS1Q15050 365 aaKnown RBP3.97□□□□□ -1.77
HDDC2-207ENST00000608532 PPHLN1Q8NEY8 458 aaKnown RBP3.97□□□□□ -1.77
HDDC2-207ENST00000608532 NSL1Q96IY1 281 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 ZNF599Q96NL3 588 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 HHATLQ9HCP6 504 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 NPAP1Q9NZP6 1156 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 CACNG5Q9UF02 275 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 KIAA1210Q9ULL0 1709 aa3.97□□□□□ -1.77
HDDC2-207ENST00000608532 PRSS51A0A1B0GVH4 220 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 ELOVL7A1L3X0 281 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 DNM1LO00429 736 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 ZNF197O14709 1029 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 EXTL3O43909 919 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 CLPTM1O96005 669 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 HADHAP40939 763 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 CLK1P49759 484 aaKnown RBP3.96□□□□□ -1.78
HDDC2-207ENST00000608532 FAM98BQ52LJ0 330 aaKnown RBP3.96□□□□□ -1.78
HDDC2-207ENST00000608532 MYPOPQ86VE0 399 aaPredicted RBP3.96□□□□□ -1.78
HDDC2-207ENST00000608532 ZNF383Q8NA42 475 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 ZFAND2BQ8WV99 257 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 ZNF653Q96CK0 615 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 MTERF3Q96E29 417 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 DACH2Q96NX9 599 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 SLC22A12Q96S37 553 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 MYADMQ96S97 322 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 RTP3Q9BQQ7 232 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 ABHD6Q9BV23 337 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 WDR13Q9H1Z4 485 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 AMACRQ9UHK6 382 aa3.96□□□□□ -1.78
HDDC2-207ENST00000608532 A0A087X002 238 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 A0A1W2PRB8 838 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 LRRC72A6NJI9 287 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 EML2O95834 649 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 MMP9P14780 707 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 GARSP41250 739 aaKnown RBP3.95□□□□□ -1.78
HDDC2-207ENST00000608532 MFAP4P55083 255 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 DCAF7P61962 342 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 SNRPD1P62314 119 aaKnown RBP3.95□□□□□ -1.78
HDDC2-207ENST00000608532 TMF1P82094 1093 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 SP3Q02447 781 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 BHLHB9Q6PI77 547 aa3.95□□□□□ -1.78
HDDC2-207ENST00000608532 SLC16A9Q7RTY1 509 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms