RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ZNF384Q8TF68 577 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PDCD6IPQ8WUM4 868 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 S100ZQ8WXG8 99 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 NKD2Q969F2 451 aaPredicted RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 KAZALD1Q96I82 304 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CNOT6LQ96LI5 555 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 TEKT5Q96M29 485 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF578Q96N58 590 aaPredicted RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PPP1R2P1Q96PQ5 205 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 LRFN3Q9BTN0 628 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SPATA9Q9BWV2 254 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SLC6A15Q9H2J7 730 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 DHX33Q9H6R0 707 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 TRIM45Q9H8W5 580 aaPredicted RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CABP5Q9NP86 173 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 MID1IP1Q9NPA3 183 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PLSCR3Q9NRY6 295 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 KCNE2Q9Y6J6 123 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CLUHO75153 1309 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SPATA31A5Q5VU36 1347 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SPATA31A7Q8IWB4 1347 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 E7EWF7 191 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CTDSP2O14595 271 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PSMA7O14818 248 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 EPHB6O15197 1021 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PRPF4O43172 522 aaKnown RBP eCLIP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 GATCO43716 136 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 GPRIN2O60269 458 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 KLHL18O94889 574 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CDK14O94921 469 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 DLGAP3O95886 979 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 BMP15O95972 392 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SERPINB2P05120 415 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 BUD31P41223 144 aaPredicted RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CDC34P49427 236 aaPredicted RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 DGKEP52429 567 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ARL4CP56559 192 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SNRPNP63162 240 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 TXNL4AP83876 142 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CYP24A1Q07973 514 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PCDH1Q08174 1060 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 TSTA3Q13630 321 aaPredicted RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 AASDHQ4L235 1098 aaPredicted RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 VWA5B1Q5TIE3 1220 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 PSAPL1Q6NUJ1 521 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 NSMFQ6X4W1 530 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 DIS3L2Q8IYB7 885 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CRYBG2Q8N1P7 616 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ZCCHC7Q8N3Z6 543 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 LNX2Q8N448 690 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 FIBCD1Q8N539 461 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 DAGLBQ8NCG7 672 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF680Q8NEM1 530 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 ABHD11Q8NFV4 315 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 OR1N1Q8NGS0 311 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 DTD1Q8TEA8 209 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 LIPHQ8WWY8 451 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 RSC1A1Q92681 617 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 GTF2H4Q92759 462 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SNAPC3Q92966 411 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CDCA5Q96FF9 252 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 FAM111AQ96PZ2 611 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 CITED1Q99966 193 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SPXQ9BT56 116 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 TRIM54Q9BYV2 358 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 BCL2L14Q9BZR8 327 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 NAA50Q9GZZ1 169 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 SLC26A1Q9H2B4 701 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 BRF2Q9HAW0 419 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 RAVER2Q9HCJ3 691 aaKnown RBP4.67□□□□□ -1.66
LINC01109-201ENST00000603837 GLTPQ9NZD2 209 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 NAGPAQ9UK23 515 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 NR2E1Q9Y466 385 aa4.67□□□□□ -1.66
LINC01109-201ENST00000603837 A0A1W2PQ09 198 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 LEUTXA8MZ59 168 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 UPK3BL1B0FP48 263 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 UPK3BL2E5RIL1 263 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 F8W036 122 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 M0R082 166 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PODXLO00592 558 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF197O14709 1029 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ULK1O75385 1050 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CBR3O75828 277 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ERBB2P04626 1255 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 SERPING1P05155 500 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 RNF224P0DH78 156 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 YBX3P16989 372 aaKnown RBP eCLIP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 DDCP20711 480 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CBLP22681 906 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PTX3P26022 381 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 GRIA3P42263 894 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ACOT2P49753 483 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 AKR1D1P51857 326 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 MAPK12P53778 367 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 MLLT10P55197 1068 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 AP1S2P56377 157 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 STARD6P59095 220 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 IL2P60568 153 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 RAB14P61106 215 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms