RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RABIFP47224 123 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 THOP1P52888 689 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 RPL6Q02878 288 aaKnown RBP22.16■■□□□ 1.14
IRF3-228ENST00000601291 PLA2G4EQ3MJ16 856 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 LIPMQ5VYY2 423 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 AMZ2Q86W34 360 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 ZNHIT2Q9UHR6 403 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 TMCO1Q9UM00 188 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 CDYLQ9Y232 598 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 INVSQ9Y283 1065 aa22.16■■□□□ 1.14
IRF3-228ENST00000601291 CCDC163A0A0D9SF12 145 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 METTL12A8MUP2 240 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 SUPT3HB4E1H0 165 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 DLX3O60479 287 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 SUPT3HO75486 399 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 CEACAM5P06731 702 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 GRK2P25098 689 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 MAPK9P45984 424 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 ARHGAP8P85298 464 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 CYHR1Q6ZMK1 362 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 ABI3BPQ7Z7G0 1075 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 C11orf96Q7Z7L8 435 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 GPSM1Q86YR5 675 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 CFAP206Q8IYR0 622 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 OXR1Q8N573 874 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 OR56A4Q8NGH8 313 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 FAM174AQ8TBP5 190 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 WDR92Q96MX6 357 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 EPN3Q9H201 632 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 COG4Q9H9E3 785 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 PRMT8Q9NR22 394 aaPredicted RBP22.15■■□□□ 1.14
IRF3-228ENST00000601291 MOSPD1Q9UJG1 213 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 PRKAB1Q9Y478 270 aa22.15■■□□□ 1.14
IRF3-228ENST00000601291 A8MT66 165 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 MAP3K13O43283 966 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 LAMTOR5O43504 91 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 IPO13O94829 963 aaKnown RBP22.14■■□□□ 1.13
IRF3-228ENST00000601291 SERPINE1P05121 402 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 C8GP07360 202 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 FGF3P11487 239 aaPredicted RBP22.14■■□□□ 1.13
IRF3-228ENST00000601291 VCLP18206 1134 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 KCNC1P48547 511 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 SP140Q13342 867 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 ZNF658BQ4V348 819 aaPredicted RBP22.14■■□□□ 1.13
IRF3-228ENST00000601291 GALNT13Q8IUC8 556 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 VRK3Q8IV63 474 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 ZNF317Q96PQ6 595 aaPredicted RBP22.14■■□□□ 1.13
IRF3-228ENST00000601291 PIKFYVEQ9Y2I7 2098 aa22.14■■□□□ 1.13
IRF3-228ENST00000601291 MEI4A8MW99 385 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 H3BM21 787 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 UBXN8O00124 270 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 S100BP04271 92 aaPredicted RBP22.13■■□□□ 1.13
IRF3-228ENST00000601291 GFAPP14136 432 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 CD27P26842 260 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 PREPP48147 710 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 SEC24CP53992 1094 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 NFKB2Q00653 900 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 SBSNQ6UWP8 590 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 ZCCHC23Q6ZST2 131 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 RAB44Q7Z6P3 723 aaPredicted RBP22.13■■□□□ 1.13
IRF3-228ENST00000601291 SLC22A15Q8IZD6 547 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 TIMM29Q9BSF4 260 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 NSRP1Q9H0G5 558 aaKnown RBP22.13■■□□□ 1.13
IRF3-228ENST00000601291 NUDT4Q9NZJ9 180 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 OARD1Q9Y530 152 aa22.13■■□□□ 1.13
IRF3-228ENST00000601291 PCYT1BQ9Y5K3 369 aaPredicted RBP22.13■■□□□ 1.13
IRF3-228ENST00000601291 PRSS38A1L453 326 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 PABPN1LA6NDY0 278 aaKnown RBP22.12■■□□□ 1.13
IRF3-228ENST00000601291 NEMP2A6NFY4 417 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 SLC16A5O15375 505 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 RRP9O43818 475 aaKnown RBP22.12■■□□□ 1.13
IRF3-228ENST00000601291 SNX2O60749 519 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 ENO2P09104 434 aaPredicted RBP22.12■■□□□ 1.13
IRF3-228ENST00000601291 DNAJB13P59910 316 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 RPA4Q13156 261 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 STX3Q13277 289 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 PTK2BQ14289 1009 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 ENPP7Q6UWV6 458 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 Q6ZSR6 202 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 FOPNLQ96NB1 174 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 CYP4F12Q9HCS2 524 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 FGF22Q9HCT0 170 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 NCKIPSDQ9NZQ3 722 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 CD274Q9NZQ7 290 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 GULP1Q9UBP9 304 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 SUFUQ9UMX1 484 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 TNFRSF10CO14798 259 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 KCNJ13O60928 360 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 MTHFD2P13995 350 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 GABPB1Q06547 395 aaPredicted RBP22.12■■□□□ 1.13
IRF3-228ENST00000601291 BST1Q10588 318 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 NFE2L1Q14494 772 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 TGFBIQ15582 683 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 PPP1R3AQ16821 1122 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 PYCR3Q53H96 274 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 UBE2R2Q712K3 238 aaPredicted RBP22.12■■□□□ 1.13
IRF3-228ENST00000601291 CHST15Q7LFX5 561 aaPredicted RBP22.12■■□□□ 1.13
IRF3-228ENST00000601291 LRRC34Q8IZ02 419 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 FBXO39Q8N4B4 442 aa22.12■■□□□ 1.13
IRF3-228ENST00000601291 LILRA3Q8N6C8 439 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms