RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ARNTLO00327 626 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 DFNA5O60443 496 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 ALBP02768 609 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 MZF1P28698 734 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 ARSFP54793 590 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 RPL38P63173 70 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 CACNG1Q06432 222 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 ADGRF1Q5T601 910 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 TMEM26Q6ZUK4 368 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 FBXO22Q8NEZ5 403 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 RNF217Q8TC41 542 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 LKAAEAR1Q8TD35 194 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 HSPBAP1Q96EW2 488 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 GLT1D1Q96MS3 346 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 COG8Q96MW5 612 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 RETREG1Q9H6L5 497 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 CARS2Q9HA77 564 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 ELOVL2Q9NXB9 296 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 PKD2L2Q9NZM6 624 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 IFT80Q9P2H3 777 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 LHX3Q9UBR4 397 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 TNPO3Q9Y5L0 923 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 DYTNA2CJ06 578 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 GRXCR2A6NFK2 248 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 FFAR3O14843 346 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 GPR42O15529 346 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 CA12O43570 354 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 SLC2A4P14672 509 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 HMOX2P30519 316 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 GDF5P43026 501 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 SMARCB1Q12824 385 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 PWP1Q13610 501 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 CRY1Q16526 586 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 PTRHD1Q6GMV3 140 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 KLHL35Q6PF15 583 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 ANKS3Q6ZW76 656 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 CHST9Q7L1S5 443 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 MILR1Q7Z6M3 343 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 STK40Q8N2I9 435 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 CLDN19Q8N6F1 224 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 OR6K2Q8NGY2 324 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 PDLIM5Q96HC4 596 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 ZNF583Q96ND8 569 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 C17orf80Q9BSJ5 609 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 TMEM45AQ9NWC5 275 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 H7C4K7 107 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 PFDN1O60925 122 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 ANXA6P08133 673 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 GGT1P19440 569 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 POLR2IP36954 125 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 DBF4BQ8NFT6 615 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 FIG4Q92562 907 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 PLD4Q96BZ4 506 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 OSBPL6Q9BZF3 934 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 CWH43Q9H720 699 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 FARSBQ9NSD9 589 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 CCL27Q9Y4X3 112 aa19.89■□□□□ 0.77
SHKBP1-225ENST00000600733 TAPBPO15533 448 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 TULP3O75386 442 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 DEAF1O75398 565 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 OTCP00480 354 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 S100BP04271 92 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 GALTP07902 379 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 RAP2AP10114 183 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 JAK1P23458 1154 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 IST1P53990 364 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 TMED1Q13445 227 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 KIAA0040Q15053 153 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 TBC1D25Q3MII6 688 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 CCNYL2Q5T2Q4 361 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 STK32CQ86UX6 486 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 APOL5Q9BWW9 433 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 IKZF5Q9H5V7 419 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 SMPD4Q9NXE4 827 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 CIDEBQ9UHD4 219 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 FAF1Q9UNN5 650 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 TET1Q8NFU7 2136 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 A0A1W2PPW3 197 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 C2orf78A6NCI8 922 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 H0YAE9 185 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 RAD51BO15315 384 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 MAGEB3O15480 346 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 PRAMEF1O95521 474 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 ALPLP05186 524 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 DCKP27707 260 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 SHMT2P34897 504 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 OR1D2P34982 312 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 HMGCLP35914 325 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 MTHFRP42898 656 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 ALDH3A2P51648 485 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 RHOAP61586 193 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 MYBPC3Q14896 1274 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 FAM98BQ52LJ0 330 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 ENPP6Q6UWR7 440 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 DNAJC14Q6Y2X3 702 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 PRR23BQ6ZRT6 265 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 SERPINA9Q86WD7 417 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 CLEC4FQ8N1N0 589 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 CARNMT1Q8N4J0 409 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 PDPRQ8NCN5 879 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms