RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	TTC1	Q99614	292 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	KIFC1	Q9BW19	673 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	RAB33B	Q9H082	229 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	ZMYND15	Q9H091	742 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	VPS37B	Q9H9H4	285 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	IMP3	Q9NV31	184 aa	Known RBP	13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	FAM8A1	Q9UBU6	413 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	EPHA6	Q9UF33	1036 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	LHX6	Q9UPM6	363 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	PCDHGA3	Q9Y5H0	932 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	PRSS21	Q9Y6M0	314 aa		13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	ZFC3H1	O60293	1989 aa	Known RBP	13.17	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	MN1	Q10571	1320 aa	Predicted RBP	13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	GOLGA6L10	A0A0M3HER8	536 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517		A8MU76	341 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517		B4E171	279 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	C9orf172	C9J069	976 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	TOX3	O15405	576 aa	Predicted RBP	13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	ANKRD34C	P0C6C1	535 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	MLN	P12872	115 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	MGAT1	P26572	445 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	NMBR	P28336	390 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	PPARG	P37231	505 aa	Predicted RBP	13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	TSPAN7	P41732	249 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	CD151	P48509	253 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	SEMA3A	Q14563	771 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	FASTKD1	Q53R41	847 aa	Known RBP	13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	SNAP47	Q5SQN1	464 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	TMEM164	Q5U3C3	297 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	ANKRD22	Q5VYY1	191 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	CAND1	Q86VP6	1230 aa	Known RBP	13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	MCU	Q8NE86	351 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	GRK7	Q8WTQ7	553 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	C9orf72	Q96LT7	481 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	RMDN2	Q96LZ7	410 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	C12orf66	Q96MD2	445 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	TAAR9	Q96RI9	348 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	OR52A5	Q9H2C5	316 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	COG4	Q9H9E3	785 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	MRM3	Q9HC36	420 aa	Known RBP	13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	OCIAD1	Q9NX40	245 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	CFAP20	Q9Y6A4	193 aa	Known RBP	13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	COLEC10	Q9Y6Z7	277 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	KIF26B	Q2KJY2	2108 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	CFAP47	Q6ZTR5	3102 aa		13.16	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	NBEA	Q8NFP9	2946 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	MAGEB16	A2A368	324 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	CD3EAP	O15446	510 aa	Known RBP	13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	CAPN5	O15484	640 aa	Predicted RBP	13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	KLK10	O43240	276 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	OR1I1	O60431	355 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	PRAMEF10	O60809	474 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	AVIL	O75366	819 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	FTH1	P02794	183 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	OR56A5	P0C7T3	313 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	NDUFS1	P28331	727 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	PDHA2	P29803	388 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	CAPZB	P47756	277 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	TERF1	P54274	439 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	GFER	P55789	205 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	MC2R	Q01718	297 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	ZNF449	Q6P9G9	518 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	KLHL35	Q6PF15	583 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	CREG2	Q8IUH2	290 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	BMPER	Q8N8U9	685 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	RSC1A1	Q92681	617 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	ZDHHC12	Q96GR4	267 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	NAF1	Q96HR8	494 aa	Known RBP	13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	NAPG	Q99747	312 aa	Predicted RBP	13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	ASPSCR1	Q9BZE9	553 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	KIR3DX1	Q9H7L2	352 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	XAB2	Q9HCS7	855 aa	Known RBP	13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	CATSPERZ	Q9NTU4	200 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	SYBU	Q9NX95	663 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	FOXJ2	Q9P0K8	574 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	KLHL3	Q9UH77	587 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	SLC24A2	Q9UI40	661 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	ANAPC5	Q9UJX4	755 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	SOX13	Q9UN79	622 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	HEBP2	Q9Y5Z4	205 aa		13.15	□□□□□ -0.3
ARHGEF1-222	ENST00000600517	FAM208B	Q5VWN6	2430 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	IGSF10	Q6WRI0	2623 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ZFHX4	Q86UP3	3567 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	EFCAB7	A8K855	629 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	LIN7A	O14910	233 aa	Predicted RBP	13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TMEM63A	O94886	807 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ARNT	P27540	789 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CD82	P27701	267 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	LEPR	P48357	1165 aa	Known RBP	13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TTPA	P49638	278 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PLOD1	Q02809	727 aa	Predicted RBP	13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CLN3	Q13286	438 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	AARS2	Q5JTZ9	985 aa	Known RBP	13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	DUS1L	Q6P1R4	473 aa	Known RBP	13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	LDB1	Q86U70	411 aa	Predicted RBP	13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PDZD3	Q86UT5	571 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	DTX1	Q86Y01	620 aa		13.14	□□□□□ -0.31

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