RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 C12orf66Q96MD2 445 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 FAM117AQ9C073 453 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 KIR3DX1Q9H7L2 352 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 PDE7BQ9NP56 450 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 NLE1Q9NVX2 485 aaPredicted RBP15.44■□□□□ 0.06
VRK3-221ENST00000600284 ZDHHC3Q9NYG2 299 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 TUBD1Q9UJT1 453 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 PACSIN2Q9UNF0 486 aaPredicted RBP15.44■□□□□ 0.06
VRK3-221ENST00000600284 HEBP2Q9Y5Z4 205 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 RPS6KL1Q9Y6S9 549 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 ZNF106Q9H2Y7 1883 aaKnown RBP15.44■□□□□ 0.06
VRK3-221ENST00000600284 IGLV3-16A0A075B6K0 115 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 OR5K3A6NET4 321 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 SPAG6O75602 509 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 METTL18O95568 372 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 AP2A1O95782 977 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 FTCDO95954 541 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 MT-ND3P03897 115 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 GSTM1P09488 218 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 SLC35G4P0C7Q5 338 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 PSMA3P25788 255 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 MC4RP32245 332 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 CCR10P46092 362 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 TMPRSS15P98073 1019 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 GSTM4Q03013 218 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 ACY1Q03154 408 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 NFATC3Q12968 1075 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 LINC00523Q86TU6 105 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 OOSP2Q86WS3 158 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 CFAP206Q8IYR0 622 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 SIDT2Q8NBJ9 832 aaKnown RBP15.43■□□□□ 0.06
VRK3-221ENST00000600284 STYXQ8WUJ0 223 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 FRMD8P1Q9BZ68 369 aaPredicted RBP15.43■□□□□ 0.06
VRK3-221ENST00000600284 SLC25A18Q9H1K4 315 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 VPS37BQ9H9H4 285 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 HRASLS2Q9NWW9 162 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 SLC24A2Q9UI40 661 aa15.43■□□□□ 0.06
VRK3-221ENST00000600284 HEMK1Q9Y5R4 338 aaPredicted RBP15.43■□□□□ 0.06
VRK3-221ENST00000600284 IGHV5-51A0A0C4DH38 117 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 TLCD2A6NGC4 264 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 ERI2A8K979 691 aaKnown RBP15.42■□□□□ 0.06
VRK3-221ENST00000600284 GOLGA6L6A8MZA4 724 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 NKX2-8O15522 239 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 CCNYL3P0C7X3 344 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 ZNF28P17035 718 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 ACRV1P26436 265 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 CD151P48509 253 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 GSE1Q14687 1217 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 DNTTIP2Q5QJE6 756 aaKnown RBP15.42■□□□□ 0.06
VRK3-221ENST00000600284 UNC5BQ8IZJ1 945 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 STARD8Q92502 1023 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 STAMBPL1Q96FJ0 436 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 CDKN2AIPNLQ96HQ2 116 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 DNAJC1Q96KC8 554 aaKnown RBP15.42■□□□□ 0.06
VRK3-221ENST00000600284 MAP3K3Q99759 626 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 DESI2Q9BSY9 194 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 TMEM121Q9BTD3 319 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 TSGA10Q9BZW7 698 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 FAM96AQ9H5X1 160 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 IL17BQ9UHF5 180 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 RARRES3Q9UL19 164 aa15.42■□□□□ 0.06
VRK3-221ENST00000600284 R3HDM2Q9Y2K5 976 aaKnown RBP15.42■□□□□ 0.06
VRK3-221ENST00000600284 CFAP20Q9Y6A4 193 aaKnown RBP15.42■□□□□ 0.06
VRK3-221ENST00000600284 A0A0U1RQJ8 604 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 UBA6A0AVT1 1052 aaPredicted RBP15.41■□□□□ 0.06
VRK3-221ENST00000600284 MATN2O00339 956 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 SLC28A2O43868 658 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 KIAA0754O94854 1291 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 RECKO95980 971 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 POLBP06746 335 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 FOLR1P15328 257 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 TPH1P17752 444 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 TCN2P20062 427 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 ARL4DP49703 201 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 GDF10P55107 478 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 POLE2P56282 527 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 PPP1CAP62136 330 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 HSD11B2P80365 405 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 CACNG1Q06432 222 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 CDC20Q12834 499 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 RPA4Q13156 261 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 TUBB3Q13509 450 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 KRT33BQ14525 404 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 SKIDA1Q1XH10 827 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 ZRANB3Q5FWF4 1079 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 ARMC6Q6NXE6 501 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 ZNF449Q6P9G9 518 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 SERPINA9Q86WD7 417 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 D2HGDHQ8N465 521 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 GALNT6Q8NCL4 622 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 SPDYE1Q8NFV5 336 aaPredicted RBP15.41■□□□□ 0.06
VRK3-221ENST00000600284 RMDN2Q96LZ7 410 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 ALS2CR12Q96Q35 445 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 KCND3Q9UK17 655 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 PADI1Q9ULC6 663 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 PCDHB3Q9Y5E6 796 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 CAPN6Q9Y6Q1 641 aa15.41■□□□□ 0.06
VRK3-221ENST00000600284 TCRBV7S2A1N4TA0A589 114 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 MROH6A6NGR9 719 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 QSOX1O00391 747 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms