RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ATP5DP30049 168 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 SKIV2L2P42285 1042 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 MAGEA12P43365 314 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 PGGT1BP53609 377 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 IL9RQ01113 521 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 PLOD1Q02809 727 aaPredicted RBP12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 ZNF844Q08AG5 666 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 BMPR2Q13873 1038 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 USP10Q14694 798 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 CASP8Q14790 479 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 TCEA2Q15560 299 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 PLEKHS1Q5SXH7 462 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 MROH9Q5TGP6 573 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 AGAP9Q5VTM2 703 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 SLC30A9Q6PML9 568 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 ABRAXAS1Q6UWZ7 409 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 LRIG3Q6UXM1 1119 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 NAPRTQ6XQN6 538 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 DBX2Q6ZNG2 339 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 TIFABQ6ZNK6 161 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 PRR23CQ6ZRP0 262 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 OTOAQ7RTW8 1153 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 TAF8Q7Z7C8 310 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 GKN2Q86XP6 184 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 CEP97Q8IW35 865 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 CFAP206Q8IYR0 622 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 CNPY4Q8N129 248 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 ZBTB2Q8N680 514 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 SIDT2Q8NBJ9 832 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 EPS8L3Q8TE67 593 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 MZB1Q8WU39 189 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 ASZ1Q8WWH4 475 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 INPP5DQ92835 1189 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 GLMNQ92990 594 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 OR52A5Q9H2C5 316 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 DPEP2Q9H4A9 486 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 CAB39LQ9H9S4 337 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 POPDC3Q9HBV1 291 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 SARS2Q9NP81 518 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 CTNNAL1Q9UBT7 734 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 SLC39A10Q9ULF5 831 aa12.4□□□□□ -0.42
CHMP2A-206ENST00000600118 NEMP2A6NFY4 417 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 EIF3FO00303 357 aaPredicted RBP12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 RASGRF2O14827 1237 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 CDH16O75309 829 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 KRT37O76014 449 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 TSPAN12O95859 305 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 ALDOAP04075 364 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 APOA4P06727 396 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 SNRPAP09012 282 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 BRAFP15056 766 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 IDSP22304 550 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 PDHA2P29803 388 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 PI4KAP42356 2102 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 SLCO1A2P46721 670 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 PREPP48147 710 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 ATXN3P54252 364 aaPredicted RBP12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 IFFO1Q0D2I5 559 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 HSPA14Q0VDF9 509 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 DNAJC3Q13217 504 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 BOP1Q14137 746 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 TMED2Q15363 201 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 TTLL9Q3SXZ7 439 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 ACSBG2Q5FVE4 666 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 CAPRIN2Q6IMN6 1127 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 UGT3A1Q6NUS8 523 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 OGFOD3Q6PK18 319 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 PAQR3Q6TCH7 311 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 TMEM207Q6UWW9 146 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 TAOK1Q7L7X3 1001 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 GATAD2AQ86YP4 633 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 VRK3Q8IV63 474 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 SLC22A15Q8IZD6 547 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 RIBC1Q8N443 379 aaPredicted RBP12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 MTBPQ96DY7 904 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 TSPAN17Q96FV3 270 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 ZIM3Q96PE6 472 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 EDEM2Q9BV94 578 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 OSGEPL1Q9H4B0 414 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 PRDM8Q9NQV8 689 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 FAM8A1Q9UBU6 413 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 LGALS13Q9UHV8 139 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 TRMT6Q9UJA5 497 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 WDR37Q9Y2I8 494 aa12.39□□□□□ -0.43
CHMP2A-206ENST00000600118 IQANK1A0A1B0GTG1 560 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 TRIM49D1C9J1S8 452 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 TRIM38O00635 465 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 PHGDHO43175 533 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 ANXA6P08133 673 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 F3P13726 295 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 ENO3P13929 434 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 ZNF37AP17032 561 aaPredicted RBP12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 SAT1P21673 171 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 ACADLP28330 430 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 SERPINB8P50452 374 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 RAB10P61026 200 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 SLC14A1Q13336 389 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 ZNF460Q14592 562 aa12.38□□□□□ -0.43
CHMP2A-206ENST00000600118 UAP1L1Q3KQV9 507 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms