RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 EIF2B3Q9NR50 452 aaKnown RBP22.09■■□□□ 1.13
CCDC9-204ENST00000599398 SSUH2Q9Y2M2 353 aa22.09■■□□□ 1.13
CCDC9-204ENST00000599398 TCAF1Q9Y4C2 921 aa22.09■■□□□ 1.13
CCDC9-204ENST00000599398 C17orf113A0A1B0GUU1 675 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 STMND1H3BQB6 276 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 GOT2P00505 430 aaKnown RBP22.08■■□□□ 1.13
CCDC9-204ENST00000599398 PSMA3P25788 255 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 FOXN2P32314 431 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 SEPHS1P49903 392 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 TERF1P54274 439 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 PRAMEP78395 509 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 KCTD19Q17RG1 926 aaPredicted RBP22.08■■□□□ 1.13
CCDC9-204ENST00000599398 KLHL35Q6PF15 583 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 AFTPHQ6ULP2 937 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 XKR5Q6UX68 686 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 FAM92BQ6ZTR7 304 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 NLRP9Q7RTR0 991 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 SLC35F6Q8N357 371 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 BMPERQ8N8U9 685 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 OR6P1Q8NGX9 317 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 ZDHHC12Q96GR4 267 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 MS4A14Q96JA4 679 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 ZNF778Q96MU6 729 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 CTRCQ99895 268 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 KCNF1Q9H3M0 494 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 COG4Q9H9E3 785 aa22.08■■□□□ 1.13
CCDC9-204ENST00000599398 TRMT1Q9NXH9 659 aaKnown RBP22.08■■□□□ 1.13
CCDC9-204ENST00000599398 TEX51A0A1B0GUA7 166 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 ANKRD34CP0C6C1 535 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 NSG1P42857 185 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 VPS41P49754 854 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 MC2RQ01718 297 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 ITIH4Q14624 930 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 TRIP13Q15645 432 aaPredicted RBP22.07■■□□□ 1.12
CCDC9-204ENST00000599398 MANEAQ5SRI9 462 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 CACHD1Q5VU97 1274 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 ZNF449Q6P9G9 518 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 RASGEF1CQ8N431 466 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 UBL7Q96S82 380 aaPredicted RBP22.07■■□□□ 1.12
CCDC9-204ENST00000599398 TTC1Q99614 292 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 AP1M1Q9BXS5 423 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 RIMKLBQ9ULI2 386 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 TTC7AQ9ULT0 858 aaPredicted RBP22.07■■□□□ 1.12
CCDC9-204ENST00000599398 HEBP2Q9Y5Z4 205 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 COLEC10Q9Y6Z7 277 aa22.07■■□□□ 1.12
CCDC9-204ENST00000599398 IFRD1O00458 451 aaPredicted RBP22.06■■□□□ 1.12
CCDC9-204ENST00000599398 KIF1CO43896 1103 aaKnown RBP22.06■■□□□ 1.12
CCDC9-204ENST00000599398 AP2A2O94973 939 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 FOXM1Q08050 763 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 SRSF6Q13247 344 aaKnown RBP22.06■■□□□ 1.12
CCDC9-204ENST00000599398 SOWAHCQ53LP3 525 aaPredicted RBP22.06■■□□□ 1.12
CCDC9-204ENST00000599398 PCID2Q5JVF3 399 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 CAPRIN2Q6IMN6 1127 aaKnown RBP22.06■■□□□ 1.12
CCDC9-204ENST00000599398 CEACAM20Q6UY09 585 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 VASH2Q86V25 355 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 DTX1Q86Y01 620 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 OR4L1Q8NH43 312 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 MAGOHBQ96A72 148 aaKnown RBP22.06■■□□□ 1.12
CCDC9-204ENST00000599398 TEFMQ96QE5 360 aaKnown RBP22.06■■□□□ 1.12
CCDC9-204ENST00000599398 APMAPQ9HDC9 416 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 FBXO8Q9NRD0 319 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 EPHA6Q9UF33 1036 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 PRSS21Q9Y6M0 314 aa22.06■■□□□ 1.12
CCDC9-204ENST00000599398 K7ENP7 123 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 QSOX1O00391 747 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 TOX3O15405 576 aaPredicted RBP22.05■■□□□ 1.12
CCDC9-204ENST00000599398 KIF5CO60282 957 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 PREPP48147 710 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 ATP1A2P50993 1020 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 PPP1CAP62136 330 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 CRADDP78560 199 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 FASTKD1Q53R41 847 aaKnown RBP22.05■■□□□ 1.12
CCDC9-204ENST00000599398 LYPLAL1Q5VWZ2 237 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 INO80CQ6PI98 192 aaPredicted RBP22.05■■□□□ 1.12
CCDC9-204ENST00000599398 PRSS42Q7Z5A4 293 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 NAP1L3Q99457 506 aaPredicted RBP22.05■■□□□ 1.12
CCDC9-204ENST00000599398 ZNF768Q9H5H4 540 aaKnown RBP22.05■■□□□ 1.12
CCDC9-204ENST00000599398 KIR3DX1Q9H7L2 352 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 CHRAC1Q9NRG0 131 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 BFARQ9NZS9 450 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 SLC24A2Q9UI40 661 aa22.05■■□□□ 1.12
CCDC9-204ENST00000599398 EIF4E1BA6NMX2 242 aaKnown RBP22.04■■□□□ 1.12
CCDC9-204ENST00000599398 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.04■■□□□ 1.12
CCDC9-204ENST00000599398 AP3B1O00203 1094 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 PGRMC1O00264 195 aaKnown RBP22.04■■□□□ 1.12
CCDC9-204ENST00000599398 POLR1CO15160 346 aaPredicted RBP22.04■■□□□ 1.12
CCDC9-204ENST00000599398 GSTM1P09488 218 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 NDUFS1P28331 727 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 PDHA2P29803 388 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 GSTM4Q03013 218 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 ACVR1Q04771 509 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 GPS1Q13098 491 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 PACS1Q6VY07 963 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 OOSP2Q86WS3 158 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 ZFPM2Q8WW38 1151 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 ELMO1Q92556 727 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 PEX13Q92968 403 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 BBC3Q96PG8 261 aaPredicted RBP22.04■■□□□ 1.12
CCDC9-204ENST00000599398 FERD3LQ96RJ6 166 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 ZPBPQ9BS86 351 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms