RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 LACTB2Q53H82 288 aaPredicted RBP9.57□□□□□ -0.88
VRK3-216ENST00000599342 ATP1A1-AS1Q5TC04 95 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 DUS1LQ6P1R4 473 aaKnown RBP9.57□□□□□ -0.88
VRK3-216ENST00000599342 ARHGEF18Q6ZSZ5 1173 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 SNX20Q7Z614 316 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 KIAA1328Q86T90 577 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 BPHLQ86WA6 291 aaPredicted RBP9.57□□□□□ -0.88
VRK3-216ENST00000599342 UBL4BQ8N7F7 174 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 OR13C4Q8NGS5 318 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 HEXDCQ8WVB3 486 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 ZFPM2Q8WW38 1151 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 MRFAP1L1Q96HT8 127 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 LINC00615Q96LM1 132 aaPredicted RBP9.57□□□□□ -0.88
VRK3-216ENST00000599342 FCRL4Q96PJ5 515 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 INSM2Q96T92 566 aaPredicted RBP9.57□□□□□ -0.88
VRK3-216ENST00000599342 COPS8Q99627 209 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 MAP3K3Q99759 626 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 KIR3DX1Q9H7L2 352 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 VPS37BQ9H9H4 285 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 LHX9Q9NQ69 397 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 ZNF71Q9NQZ8 489 aaPredicted RBP9.57□□□□□ -0.88
VRK3-216ENST00000599342 HRASLS2Q9NWW9 162 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 SEMA5BQ9P283 1151 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 ANAPC2Q9UJX6 822 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 PADI1Q9ULC6 663 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 POLHQ9Y253 713 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 HEBP2Q9Y5Z4 205 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 DUSP10Q9Y6W6 482 aa9.57□□□□□ -0.88
VRK3-216ENST00000599342 ZNF462Q96JM2 2506 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 OR6C74A6NCV1 312 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 C21orf140B9A014 251 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 IFRD1O00458 451 aaPredicted RBP9.56□□□□□ -0.88
VRK3-216ENST00000599342 ZBTB11O95625 1053 aaPredicted RBP9.56□□□□□ -0.88
VRK3-216ENST00000599342 POLBP06746 335 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 EBLN1P0CF75 366 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 ATP1B2P14415 290 aaPredicted RBP9.56□□□□□ -0.88
VRK3-216ENST00000599342 FOLR1P15328 257 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 F8A1P23610 371 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 PRLHRP49683 370 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 ZNF75DP51815 510 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 VAV2P52735 878 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 ZNF140P52738 457 aaPredicted RBP9.56□□□□□ -0.88
VRK3-216ENST00000599342 TUBB4BP68371 445 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 HSD11B2P80365 405 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 XIAPP98170 497 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 DNASE1L3Q13609 305 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 TUBB2AQ13885 445 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 SPARCL1Q14515 664 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 SKIDA1Q1XH10 827 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 ZRANB3Q5FWF4 1079 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 TMTC4Q5T4D3 741 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 PWWP2BQ6NUJ5 590 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 AADACL2Q6P093 401 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 ZNF449Q6P9G9 518 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 PEX26Q7Z412 305 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 TMEM126BQ8IUX1 230 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 CFAP206Q8IYR0 622 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 SYCE1Q8N0S2 351 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 NXPE1Q8N323 547 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 TXLNBQ8N3L3 684 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 ACRBPQ8NEB7 543 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 SPDYE1Q8NFV5 336 aaPredicted RBP9.56□□□□□ -0.88
VRK3-216ENST00000599342 HM13Q8TCT9 377 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 NAT14Q8WUY8 206 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 SEC14L1Q92503 715 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 ABHD17AQ96GS6 310 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 C19orf43Q9BQ61 176 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 CCM2Q9BSQ5 444 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 TUBB2BQ9BVA1 445 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 TWSG1Q9GZX9 223 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 FANCEQ9HB96 536 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 FGF21Q9NSA1 209 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 SOHLH2Q9NX45 425 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 SLC24A2Q9UI40 661 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 AMFRQ9UKV5 643 aa9.56□□□□□ -0.88
VRK3-216ENST00000599342 GCN1Q92616 2671 aaKnown RBP9.56□□□□□ -0.88
VRK3-216ENST00000599342 C17orf113A0A1B0GUU1 675 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 PIPSLA2A3N6 862 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 GSAPA4D1B5 854 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 CDC14CA4D256 554 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 GRID2IPA4D2P6 1211 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 AGAP14A8MT82 685 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 MIF4GDA9UHW6 222 aaKnown RBP9.55□□□□□ -0.88
VRK3-216ENST00000599342 MKRN2OSH3BPM6 223 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 MATN2O00339 956 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 ARHGAP6O43182 974 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 MAP3K7O43318 606 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 CPNE3O75131 537 aaKnown RBP9.55□□□□□ -0.88
VRK3-216ENST00000599342 CREG1O75629 220 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 TIAF1O95411 115 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 NTRK1P04629 796 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 CDH3P22223 829 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 MC4RP32245 332 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 PARP6Q2NL67 630 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 P3H1Q32P28 736 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 GPR33Q49SQ1 333 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 CAPRIN2Q6IMN6 1127 aaKnown RBP9.55□□□□□ -0.88
VRK3-216ENST00000599342 RAD9BQ6WBX8 426 aa9.55□□□□□ -0.88
VRK3-216ENST00000599342 CARFQ8N187 725 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms