RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 PRMT5O14744 637 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 RAD51BO15315 384 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 RGS16O15492 202 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 FAM155BO75949 473 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 IGHV4-34P06331 123 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 F7P08709 466 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 MYF5P13349 255 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 NSG1P42857 185 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 LEPRP48357 1165 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 LIMK2P53671 638 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 RIPPLY3P57055 190 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 CDK3Q00526 305 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 DNAJC3Q13217 504 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 GPS2Q13227 327 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 INPP5AQ14642 412 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 RASA2Q15283 850 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 KIAA1614Q5VZ46 1190 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 PTRHD1Q6GMV3 140 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 ADGRD1Q6QNK2 874 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 ZC3HC1Q86WB0 502 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 GPATCH11Q8N954 259 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 PLA2G15Q8NCC3 412 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 LPGAT1Q92604 370 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 CENPTQ96BT3 561 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 BIRC7Q96CA5 298 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 MTBPQ96DY7 904 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 ELMO2Q96JJ3 720 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 SERAC1Q96JX3 654 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 DHRS4Q9BTZ2 278 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 TSSK1BQ9BXA7 367 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 MBNL1Q9NR56 388 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 STARD5Q9NSY2 213 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 CTNNAL1Q9UBT7 734 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 TBK1Q9UHD2 729 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 EIF2B4Q9UI10 523 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 GNPTGQ9UJJ9 305 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 CRYL1Q9Y2S2 319 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 PCDHB1Q9Y5F3 818 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 COMMD10Q9Y6G5 202 aa11.88□□□□□ -0.51
SHKBP1-213ENST00000597325 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 FAM95CA0A1B0GW59 222 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 A0A1W2PPC4 97 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 A6NNZ2 444 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 H3BMM5 538 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 K7ENP7 123 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 CACNB4O00305 520 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 QSOX1O00391 747 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 SASH3O75995 380 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 HAUS5O94927 633 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 SOD1P00441 154 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 AHSGP02765 367 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 ESR1P03372 595 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 ITGA2BP08514 1039 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 SNRPAP09012 282 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 MYCLP1P12525 358 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 KRT15P19012 456 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 GCAP28676 217 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 FMO4P31512 558 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 ACADVLP49748 655 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 CCT8P50990 548 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 SLC12A2P55011 1212 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 NFKB2Q00653 900 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 BMPR2Q13873 1038 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 C6orf132Q5T0Z8 1188 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 MROH9Q5TGP6 573 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 FAM45BPQ6NSW5 357 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 INO80CQ6PI98 192 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 CNSTQ6PJW8 725 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 TRIM74Q86UV6 250 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 FAM45AQ8TCE6 357 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 ZBTB9Q96C00 473 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 TSPAN17Q96FV3 270 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 ZNF578Q96N58 590 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 KLF6Q99612 283 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 AASDHPPTQ9NRN7 309 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 LGALS13Q9UHV8 139 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 MAN2B2Q9Y2E5 1009 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 OR1A2Q9Y585 309 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 OTOGQ6ZRI0 2925 aa11.87□□□□□ -0.51
SHKBP1-213ENST00000597325 IGLV3-16A0A075B6K0 115 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 TRIM49D1C9J1S8 452 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 E5RI56 91 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 H0Y8X5 98 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 TOR1BO14657 336 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 OR1I1O60431 355 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 MTX2O75431 263 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 AP2A2O94973 939 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 ASMTLO95671 621 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 OR56A5P0C7T3 313 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 ATP1B2P14415 290 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 SAT1P21673 171 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 RPS3P23396 243 aaKnown RBP eCLIP11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 CD27P26842 260 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 SERPINB8P50452 374 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 AFF3P51826 1226 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 ADARP55265 1226 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 KIAA1024LP59773 190 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 POU4F1Q01851 419 aa11.86□□□□□ -0.51
SHKBP1-213ENST00000597325 HSP90B2PQ58FF3 399 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms