RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 HOMER3Q9NSC5 361 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 IMP3Q9NV31 184 aaKnown RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 PIH1D1Q9NWS0 290 aaKnown RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 PAK5Q9P286 719 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 TMEM184BQ9Y519 407 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 HEBP2Q9Y5Z4 205 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 ATRXP46100 2492 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 HEATR9A2RTY3 570 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 QSOX1O00391 747 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 KIF1CO43896 1103 aaKnown RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 RAD1O60671 282 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 RASSF9O75901 435 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 FGGP02679 453 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 ITGB2P05107 769 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 POLBP06746 335 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 APRTP07741 180 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 SLC35G4P0C7Q5 338 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 ETS1P14921 441 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 NELFEP18615 380 aaKnown RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 MSNP26038 577 aaKnown RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 RPL22P35268 128 aaKnown RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 GRIA1P42261 906 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 NSG1P42857 185 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 LMAN1P49257 510 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 ACVR1Q04771 509 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 SRSF6Q13247 344 aaKnown RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 ITIH4Q14624 930 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 GSE1Q14687 1217 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 DBN1Q16643 649 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 TSTD2Q5T7W7 516 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 LYPLAL1Q5VWZ2 237 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 KIAA1614Q5VZ46 1190 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 ZNF449Q6P9G9 518 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 PPP1R21Q6ZMI0 780 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 NLRP9Q7RTR0 991 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 VASH2Q86V25 355 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 BPHLQ86WA6 291 aaPredicted RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 NLGN4XQ8N0W4 816 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 CLDN19Q8N6F1 224 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 IL22RA1Q8N6P7 574 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 GLIS1Q8NBF1 620 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 NLGN4YQ8NFZ3 816 aaPredicted RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 OR13J1Q8NGT2 312 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 GPR150Q8NGU9 434 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 NAT14Q8WUY8 206 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 JPH3Q8WXH2 748 aaPredicted RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 UBXN4Q92575 508 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 SLC41A2Q96JW4 573 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 C12orf66Q96MD2 445 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 CD180Q99467 661 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 CTRCQ99895 268 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 OR52A5Q9H2C5 316 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 KIR3DX1Q9H7L2 352 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 APMAPQ9HDC9 416 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 WDR70Q9NW82 654 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 HRASLS2Q9NWW9 162 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 SLC24A2Q9UI40 661 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 PPP2R2CQ9Y2T4 447 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 PCDHGA4Q9Y5G9 962 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 CFAP20Q9Y6A4 193 aaKnown RBP10.27□□□□□ -0.77
CCDC9-203ENST00000596938 KIF26BQ2KJY2 2108 aa10.27□□□□□ -0.77
CCDC9-203ENST00000596938 AHCTF1Q8WYP5 2266 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 CCDC162PA2VCL2 907 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 OR5K3A6NET4 321 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 AP3B1O00203 1094 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 CEP104O60308 925 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 STK17BO94768 372 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 ZSCAN5DPP0CG00 497 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 PRSS56P0CW18 603 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 FGF5P12034 268 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 WT1P19544 449 aaPredicted RBP10.26□□□□□ -0.77
CCDC9-203ENST00000596938 SEPHS1P49903 392 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 ABHD18Q0P651 414 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 C19orf57Q0VDD7 668 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 COL9A2Q14055 689 aaPredicted RBP10.26□□□□□ -0.77
CCDC9-203ENST00000596938 MAP7Q14244 749 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 KRT33BQ14525 404 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 PLCL1Q15111 1095 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 CCDC38Q502W7 563 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 IRGCQ6NXR0 463 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 CYB5D1Q6P9G0 228 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 PACS1Q6VY07 963 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 CERS6Q6ZMG9 384 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 FAM92BQ6ZTR7 304 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 TIPARPQ7Z3E1 657 aaKnown RBP10.26□□□□□ -0.77
CCDC9-203ENST00000596938 PRUNE1Q86TP1 453 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 KMT5CQ86Y97 462 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 CARFQ8N187 725 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 LILRA3Q8N6C8 439 aaPredicted RBP10.26□□□□□ -0.77
CCDC9-203ENST00000596938 ACVR1CQ8NER5 493 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 HDAC10Q969S8 669 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 RMDN2Q96LZ7 410 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 FCRL4Q96PJ5 515 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 OR6C1Q96RD1 312 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 TTC1Q99614 292 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 SLC12A9Q9BXP2 914 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 COG4Q9H9E3 785 aa10.26□□□□□ -0.77
CCDC9-203ENST00000596938 EIF2B3Q9NR50 452 aaKnown RBP10.26□□□□□ -0.77
CCDC9-203ENST00000596938 SMARCAL1Q9NZC9 954 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms