RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 IMP3Q9NV31 184 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 SLC39A1Q9NY26 324 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 EPHA6Q9UF33 1036 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 B3GALT1Q9Y5Z6 326 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 ATMQ13315 3056 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 SDK2Q58EX2 2172 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 EFSO43281 561 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 AP2A2O94973 939 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 ANKRD34CP0C6C1 535 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 NSG1P42857 185 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 CAPZBP47756 277 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 SESN2P58004 480 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 CRADDP78560 199 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 MC2RQ01718 297 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 ITIH4Q14624 930 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 PCID2Q5JVF3 399 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 DUS1LQ6P1R4 473 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 AFTPHQ6ULP2 937 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 PACS1Q6VY07 963 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 FAM129CQ86XR2 697 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 OR4L1Q8NH43 312 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 MAGOHBQ96A72 148 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 FCRL3Q96P31 734 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 TGM7Q96PF1 710 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 DDA1Q9BW61 102 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 RAB33BQ9H082 229 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 OR52A5Q9H2C5 316 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 COG4Q9H9E3 785 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 NEU2Q9Y3R4 380 aa18.06■□□□□ 0.48
SHKBP1-202ENST00000593764 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 USP27XA6NNY8 438 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 KIF1CO43896 1103 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 OR1I1O60431 355 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 SLC35G4P0C7Q5 338 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 LIPCP11150 499 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 TPSB2P20231 275 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 CD82P27701 267 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 PDHA2P29803 388 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 COILP38432 576 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 MAGEA6P43360 314 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 NPY2RP49146 381 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 UCNP55089 124 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 TMPRSS3P57727 454 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 CXADRP78310 365 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 CDK16Q00536 496 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 KCNJ11Q14654 390 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 TPSAB1Q15661 275 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 OR6P1Q8NGX9 317 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 ACTRT1Q8TDG2 376 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 SNRNP27Q8WVK2 155 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 ZFPM2Q8WW38 1151 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 IL22Q9GZX6 179 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 KIR3DX1Q9H7L2 352 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 FBXO8Q9NRD0 319 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 TREX1Q9NSU2 369 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 SNX12Q9UMY4 172 aa18.05■□□□□ 0.48
SHKBP1-202ENST00000593764 PGRMC1O00264 195 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 ZNF185O15231 689 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 TOX3O15405 576 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 KIF5CO60282 957 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 KRT14P02533 472 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 VPS41P49754 854 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 PPP1CAP62136 330 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 GPS1Q13098 491 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 SRSF6Q13247 344 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 SEMA3AQ14563 771 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 LYPLAL1Q5VWZ2 237 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 ANKS6Q68DC2 871 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 LRRC8BQ6P9F7 803 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 GPR155Q7Z3F1 870 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 PPHLN1Q8NEY8 458 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 CCNL2Q96S94 520 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 NAP1L3Q99457 506 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 SPRY4Q9C004 299 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 ZNF768Q9H5H4 540 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 VPS37BQ9H9H4 285 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 APMAPQ9HDC9 416 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 SIDT1Q9NXL6 827 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 SEMA5BQ9P283 1151 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 SLC24A2Q9UI40 661 aa18.04■□□□□ 0.48
SHKBP1-202ENST00000593764 K7ENP7 123 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 AP3B1O00203 1094 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 CES2O00748 559 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 GSTM1P09488 218 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 MGAT1P26572 445 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 NMBRP28336 390 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 PREPP48147 710 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 RAB15P59190 212 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 PRAMEP78395 509 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 GSTM4Q03013 218 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 VAC14Q08AM6 782 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 RPA4Q13156 261 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 GSE1Q14687 1217 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 DCAF12Q5T6F0 453 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 ARHGAP40Q5TG30 622 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 ANKRD22Q5VYY1 191 aa18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 INO80CQ6PI98 192 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-202ENST00000593764 CCDC137Q6PK04 289 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms