RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 B4GALNT1Q00973 533 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 CBX2Q14781 532 aaPredicted RBP19.36■□□□□ 0.69
CLIP3-206ENST00000593074 ATP13A5Q4VNC0 1218 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 ATP6AP1LQ52LC2 224 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 Q6ZVU0 165 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 ADIPOR2Q86V24 386 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 TMEM102Q8N9M5 508 aaPredicted RBP19.36■□□□□ 0.69
CLIP3-206ENST00000593074 ICA1LQ8NDH6 482 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 METTL6Q8TCB7 284 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 ING5Q8WYH8 240 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 TMEM79Q9BSE2 394 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 BRD9Q9H8M2 597 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 HEBP1Q9NRV9 189 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 KCTD5Q9NXV2 234 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 ZIM2Q9NZV7 527 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 DLGAP2Q9P1A6 1054 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 MRPS23Q9Y3D9 190 aaKnown RBP19.36■□□□□ 0.69
CLIP3-206ENST00000593074 HCFC2Q9Y5Z7 792 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 PIKFYVEQ9Y2I7 2098 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 DPPA5A6NC42 116 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 ASPDHA6ND91 283 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 SLC9A3R1O14745 358 aaPredicted RBP19.36■□□□□ 0.69
CLIP3-206ENST00000593074 C1SP09871 688 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 HSD17B1P14061 328 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 CEBPBP17676 345 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 HTR6P50406 440 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 KCNK10P57789 538 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 SPATS1Q496A3 300 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 SULT1C3Q6IMI6 304 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 PDE12Q6L8Q7 609 aaKnown RBP19.36■□□□□ 0.69
CLIP3-206ENST00000593074 PLPP6Q8IY26 295 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 CHST14Q8NCH0 376 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 ATP6V1E2Q96A05 226 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 ULK4Q96C45 1275 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 RHBDF1Q96CC6 855 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 LRRC58Q96CX6 371 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 SLC45A3Q96JT2 553 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 COPS8Q99627 209 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 APOL5Q9BWW9 433 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 IPPKQ9H8X2 491 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 RNASEH1O60930 286 aaKnown RBP19.35■□□□□ 0.69
CLIP3-206ENST00000593074 EEDO75530 441 aaKnown RBP19.35■□□□□ 0.69
CLIP3-206ENST00000593074 SLC22A3O75751 556 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 RNASEH2AO75792 299 aaKnown RBP19.35■□□□□ 0.69
CLIP3-206ENST00000593074 GUCA1CO95843 209 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 LYNP07948 512 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 SPINT3P49223 89 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 MAP7D1Q3KQU3 841 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 IRAK1BP1Q5VVH5 260 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 IL23RQ5VWK5 629 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 CAPRIN2Q6IMN6 1127 aaKnown RBP19.35■□□□□ 0.69
CLIP3-206ENST00000593074 KIAA0907Q7Z7F0 614 aaPredicted RBP19.35■□□□□ 0.69
CLIP3-206ENST00000593074 RBM23Q86U06 439 aaKnown RBP19.35■□□□□ 0.69
CLIP3-206ENST00000593074 SLC15A3Q8IY34 581 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 SFRP1Q8N474 314 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 FNDC5Q8NAU1 212 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 OR2A12Q8NGT7 310 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 PBXIP1Q96AQ6 731 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 ZNF707Q96C28 371 aaPredicted RBP19.35■□□□□ 0.69
CLIP3-206ENST00000593074 C1orf50Q9BV19 199 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 TRIM54Q9BYV2 358 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 SLC2A11Q9BYW1 496 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 CD244Q9BZW8 370 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 MARK1Q9P0L2 795 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 B4GALT6Q9UBX8 382 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 AP4S1Q9Y587 144 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 NOTCH4Q99466 2003 aa19.35■□□□□ 0.69
CLIP3-206ENST00000593074 EIF3FO00303 357 aaPredicted RBP19.34■□□□□ 0.69
CLIP3-206ENST00000593074 DNAJA2O60884 412 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 POLR2EP19388 210 aaKnown RBP19.34■□□□□ 0.69
CLIP3-206ENST00000593074 SLC6A2P23975 617 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 ARL1P40616 181 aaPredicted RBP19.34■□□□□ 0.69
CLIP3-206ENST00000593074 UFM1P61960 85 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 MED21Q13503 144 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 GDPD4Q6W3E5 623 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 RNF165Q6ZSG1 346 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 RFLNAQ6ZTI6 216 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 DHFR2Q86XF0 187 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 APLFQ8IW19 511 aaPredicted RBP19.34■□□□□ 0.69
CLIP3-206ENST00000593074 NAT16Q8N8M0 369 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 EGFL8Q99944 293 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 IL1RL2Q9HB29 575 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 PIDD1Q9HB75 910 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 LSM1O15116 133 aaKnown RBP19.34■□□□□ 0.69
CLIP3-206ENST00000593074 SYNCRIPO60506 623 aaKnown RBP19.34■□□□□ 0.69
CLIP3-206ENST00000593074 POU2F2P09086 479 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 UBTFL6P0CB48 400 aaPredicted RBP19.34■□□□□ 0.69
CLIP3-206ENST00000593074 PIM1P11309 404 aaPredicted RBP19.34■□□□□ 0.69
CLIP3-206ENST00000593074 RECQLP46063 649 aaPredicted RBP19.34■□□□□ 0.69
CLIP3-206ENST00000593074 OR52E8Q6IFG1 317 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 IL27RAQ6UWB1 636 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 AHI1Q8N157 1196 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 CMTM6Q9NX76 183 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 WWOXQ9NZC7 414 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 OPTCQ9UBM4 332 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 ERVW-1Q9UQF0 538 aa19.34■□□□□ 0.69
CLIP3-206ENST00000593074 FAM234BA2RU67 622 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 MSH3P20585 1137 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 SLC7A1P30825 629 aa19.33■□□□□ 0.69
CLIP3-206ENST00000593074 POLR2JP52435 117 aaKnown RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms