RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 ZBTB2Q8N680 514 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 OR8K5Q8NH50 307 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-238ENST00000592412 TCTN2Q96GX1 697 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 MRGPRX2Q96LB1 330 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 TLR10Q9BXR5 811 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 TRABDQ9H4I3 376 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 KIR3DX1Q9H7L2 352 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 CASS4Q9NQ75 786 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 SAE1Q9UBE0 346 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-238ENST00000592412 SNX7Q9UNH6 387 aa17.81■□□□□ 0.44
CIRBP-238ENST00000592412 GLYATL1P3A0A0U1RQE8 302 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 SSU72P8A0A1W2PR75 194 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 WIPF3A6NGB9 483 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 SGTAO43765 313 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 CLDN1O95832 211 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 NFKB1P19838 968 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 DYNLT1P63172 113 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 XRCC4Q13426 336 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 PTPRCAPQ14761 206 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 ASTE1Q2TB18 679 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-238ENST00000592412 FNBP1LQ5T0N5 605 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 SLC25A41Q8N5S1 370 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 LILRA3Q8N6C8 439 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-238ENST00000592412 OR1L3Q8NH93 324 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 CTNNBL1Q8WYA6 563 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-238ENST00000592412 C19orf60Q96EN9 201 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 OXNAD1Q96HP4 312 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-238ENST00000592412 RMDN2Q96LZ7 410 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 C12orf66Q96MD2 445 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 NRTNQ99748 197 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 NLNQ9BYT8 704 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 ZCCHC2Q9C0B9 1178 aaKnown RBP17.8■□□□□ 0.44
CIRBP-238ENST00000592412 PCMTD2Q9NV79 361 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 SMOXQ9NWM0 555 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 FAM153AQ9UHL3 310 aa17.8■□□□□ 0.44
CIRBP-238ENST00000592412 LUC7L2Q9Y383 392 aaKnown RBP17.8■□□□□ 0.44
CIRBP-238ENST00000592412 F5H423 210 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-238ENST00000592412 ZNF185O15231 689 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 DPM1O60762 260 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 HNRNPH3P31942 346 aaKnown RBP17.79■□□□□ 0.44
CIRBP-238ENST00000592412 GSDMDP57764 484 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 PPP2R5EQ16537 467 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 SLC18A3Q16572 532 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 DET1Q7L5Y6 550 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 CARFQ8N187 725 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 GLIS1Q8NBF1 620 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 ZFPM2Q8WW38 1151 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 PNPLA2Q96AD5 504 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 RNF25Q96BH1 459 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-238ENST00000592412 SOHLH2Q9NX45 425 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 LCMT1Q9UIC8 334 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 ERRFI1Q9UJM3 462 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-238ENST00000592412 POMT2Q9UKY4 750 aa17.79■□□□□ 0.44
CIRBP-238ENST00000592412 MGAT4DA6NG13 374 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 SLC9B1P1A6NJY1 282 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 A6NL46 340 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 KRT86O43790 486 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 DDAH2O95865 285 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 EPOP01588 193 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 KRT1P04264 644 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 KLK3P07288 261 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-238ENST00000592412 TMEM253P0C7T8 217 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 PECAM1P16284 738 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-238ENST00000592412 POLR2CP19387 275 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-238ENST00000592412 VAV2P52735 878 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 ADCY2Q08462 1091 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 SLC1A5Q15758 541 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 TMTC4Q5T4D3 741 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 ZDHHC20Q5W0Z9 365 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 MFSD7Q6UXD7 560 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 GLT6D1Q7Z4J2 308 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 RFX6Q8HWS3 928 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 SYTL1Q8IYJ3 562 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 OR2L2Q8NH16 312 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 PRR7Q8TB68 274 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 SLC35G2Q8TBE7 412 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 BLOC1S5Q8TDH9 187 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 CPT1BQ92523 772 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 SMAD5Q99717 465 aaKnown RBP17.78■□□□□ 0.44
CIRBP-238ENST00000592412 SLAMF7Q9NQ25 335 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 FAM8A1Q9UBU6 413 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 OTOGQ6ZRI0 2925 aa17.78■□□□□ 0.44
CIRBP-238ENST00000592412 SEC16AO15027 2179 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 FER1L5A0AVI2 2057 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 LDLRP01130 860 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 ZFXP17010 805 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-238ENST00000592412 DCTP40126 519 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 UBASH3AP57075 661 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 RAPSNQ13702 412 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 ATP1A4Q13733 1029 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 ITGA9Q13797 1035 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 TAZQ16635 292 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 PTCHD3Q3KNS1 767 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 ZNF385CQ66K41 422 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-238ENST00000592412 DAAM2Q86T65 1068 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 LUZP1Q86V48 1076 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 SNRNP40Q96DI7 357 aaKnown RBP17.77■□□□□ 0.44
CIRBP-238ENST00000592412 MAK16Q9BXY0 300 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms