RNA–Protein interactions for RNA: ENST00000591649.5

ILF3-221, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 2,579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-221	ENST00000591649	LY6K	Q17RY6	165 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	TBRG1	Q3YBR2	411 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	SYT6	Q5T7P8	510 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	IER5	Q5VY09	327 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	PROSER1	Q86XN7	944 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	DTX3	Q8N9I9	347 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	JPH3	Q8WXH2	748 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	CCDC126	Q96EE4	140 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	SNX18	Q96RF0	628 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	TBL1Y	Q9BQ87	522 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	ERVK-6	Q9BXR3	956 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	LRRC3	Q9BY71	257 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	FZD8	Q9H461	694 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	KAT8	Q9H7Z6	458 aa	Known RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	RPRD1B	Q9NQG5	326 aa	Known RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	NCF1B	A6NI72	391 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	NCF1C	A8MVU1	366 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	SCO1	O75880	301 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	ANXA6	P08133	673 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	HOXD8	P13378	290 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	NCF1	P14598	390 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	CBL	P22681	906 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	GADD45A	P24522	165 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	KPNA2	P52292	529 aa	Known RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	RBP5	P82980	135 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	NRG1	Q02297	640 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	EMX2	Q04743	252 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	MBTD1	Q05BQ5	628 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	SLAMF1	Q13291	335 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	TP53BP2	Q13625	1128 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	AHSA2	Q719I0	299 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	UBQLNL	Q8IYU4	475 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	OR2T11	Q8NH01	316 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	NPLOC4	Q8TAT6	608 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649		Q96MT0	163 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	RANGRF	Q9HD47	186 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	SPEF1	Q9Y4P9	236 aa		13.98	□□□□□ -0.17
ILF3-221	ENST00000591649	LRRC37A	A6NMS7	1700 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	DFFA	O00273	331 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	AIRE	O43918	545 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	NPR1	P16066	1061 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	DCT	P40126	519 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	ACOX1	Q15067	660 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	OR4D1	Q15615	310 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	LINC00299	Q6ZSB3	139 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	DET1	Q7L5Y6	550 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	CYP4Z1	Q86W10	505 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	SLC22A9	Q8IVM8	553 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	TCAIM	Q8N3R3	496 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	BEST2	Q8NFU1	509 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	PJA1	Q8NG27	643 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	OR5H6	Q8NGV6	325 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	OR10A6	Q8NH74	314 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	TTC9	Q92623	222 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	CDADC1	Q9BWV3	514 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	ZNF717	Q9BY31	904 aa	Predicted RBP	13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	TOR4A	Q9NXH8	423 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	VNN3	Q9NY84	501 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	ADGRE2	Q9UHX3	823 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	PCDHGB6	Q9Y5F9	930 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	BTAF1	O14981	1849 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	C12orf71	A8MTZ7	269 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	PDHX	O00330	501 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	CPNE3	O75131	537 aa	Known RBP	13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	EED	O75530	441 aa	Known RBP	13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	CRCP	O75575	148 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	MLYCD	O95822	493 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	TOP3A	Q13472	1001 aa	Predicted RBP	13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	XRRA1	Q6P2D8	792 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	SLC47A1	Q96FL8	570 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	RBM4B	Q9BQ04	359 aa	Known RBP	13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	RBM4	Q9BWF3	364 aa	Known RBP	13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	NUAK2	Q9H093	628 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	IKZF5	Q9H5V7	419 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	ACTR8	Q9H981	624 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	WBP11	Q9Y2W2	641 aa	Known RBP	13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	SNX8	Q9Y5X2	465 aa		13.97	□□□□□ -0.17
ILF3-221	ENST00000591649	NUP214	P35658	2090 aa	Predicted RBP	13.97	□□□□□ -0.17
ILF3-221	ENST00000591649		A0A096LPI6	279 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	ERI2	A8K979	691 aa	Known RBP	13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	DIRAS1	O95057	198 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	CYP11A1	P05108	521 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	CFL1	P23528	166 aa	Known RBP	13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	C21orf33	P30042	268 aa	Predicted RBP	13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	CRISP3	P54108	245 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	ATN1	P54259	1190 aa	Predicted RBP	13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	FOXM1	Q08050	763 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	MADCAM1	Q13477	382 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	TMEM132B	Q14DG7	1078 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	ZNF544	Q6NX49	715 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	DLEU7	Q6UYE1	221 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	IDO2	Q6ZQW0	420 aa		13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	PPHLN1	Q8NEY8	458 aa	Known RBP	13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	C18orf25	Q96B23	403 aa	Predicted RBP	13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	SDHC	Q99643	169 aa	Predicted RBP	13.96	□□□□□ -0.17
ILF3-221	ENST00000591649	KCNS3	Q9BQ31	491 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms