RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 CTSKP43235 329 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 GNPDA1P46926 289 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 PLTPP55058 493 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 PFN3P60673 137 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 BNC1Q01954 994 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 DPTQ07507 201 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 MAP4K2Q12851 820 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 LAMB3Q13751 1172 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ITGA9Q13797 1035 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 GTF2H3Q13889 308 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 PTK2BQ14289 1009 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 SEPT7Q16181 437 aaKnown RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ALG11Q2TAA5 492 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 UAP1L1Q3KQV9 507 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ATP13A5Q4VNC0 1218 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 PRAMEF14Q5SWL7 426 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ZNF648Q5T619 568 aaPredicted RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 TSTD2Q5T7W7 516 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ZDHHC20Q5W0Z9 365 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ANKRD34AQ69YU3 496 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 HIBCHQ6NVY1 386 aaPredicted RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 PNCKQ6P2M8 343 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 SLC23A3Q6PIS1 610 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 DET1Q7L5Y6 550 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 TAS2R42Q7RTR8 314 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 CAND1Q86VP6 1230 aaKnown RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 IQCHQ86VS3 1027 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 SPATS2Q86XZ4 545 aaKnown RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 TRAPPC5Q8IUR0 188 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 GSPT2Q8IYD1 628 aaKnown RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 KIAA2013Q8IYS2 634 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 RBFAQ8N0V3 343 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 PDIK1LQ8N165 341 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 MMGT1Q8N4V1 131 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 TRAM1L1Q8N609 369 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 BBOF1Q8ND07 529 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 MCUQ8NE86 351 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 STYXQ8WUJ0 223 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 RNF141Q8WVD5 230 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 OR1E3Q8WZA6 343 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 GLYATL1Q969I3 302 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 CENPTQ96BT3 561 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ULK4Q96C45 1275 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 HIC2Q96JB3 615 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 BMFQ96LC9 184 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 CCDC140Q96MF4 163 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ZNF778Q96MU6 729 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 RANBP9Q96S59 729 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 APOOQ9BUR5 198 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ASPNQ9BXN1 380 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ASPSCR1Q9BZE9 553 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 PRDM14Q9GZV8 571 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 CDH19Q9H159 772 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 FAM96AQ9H5X1 160 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ACSS3Q9H6R3 686 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 GAREM1Q9H706 876 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 CARS2Q9HA77 564 aaKnown RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 FGF22Q9HCT0 170 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 IL26Q9NPH9 171 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 TMEM9BQ9NQ34 198 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 CATSPERZQ9NTU4 200 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 NLE1Q9NVX2 485 aaPredicted RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 GEMIN8Q9NWZ8 242 aaKnown RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 GRHL1Q9NZI5 618 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 IL1RAPL1Q9NZN1 696 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 IL17CQ9P0M4 197 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 APOBEC3BQ9UH17 382 aaKnown RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 TMEM98Q9Y2Y6 226 aa6.33□□□□□ -1.4
VPS4B-205ENST00000591383 OAS3Q9Y6K5 1087 aaKnown RBP6.33□□□□□ -1.4
VPS4B-205ENST00000591383 ZFC3H1O60293 1989 aaKnown RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 TCRBV16S1A1N1A0A5B0 115 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 TMEM202A6NGA9 273 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 MROH6A6NGR9 719 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 SDR42E2A6NKP2 422 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 GAPDHSO14556 408 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 UGT1A9O60656 530 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 SRP72O76094 671 aaKnown RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 SLC25A14O95258 325 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 GOT2P00505 430 aaKnown RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 ZNF806P0C7X5 589 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 JMJD7P0C870 316 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 PRSS56P0CW18 603 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 PGAM1P18669 254 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 PAMP19021 973 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 UGT1A6P19224 532 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 UGT1A1P22309 533 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 UGT1A4P22310 534 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 IVDP26440 423 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 NMBRP28336 390 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 EPHA8P29322 1005 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 UGT1A3P35503 534 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 UGT1A5P35504 534 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 PLA2G5P39877 138 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 MAGEA3P43357 314 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 POLD2P49005 469 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 NPY2RP49146 381 aa6.32□□□□□ -1.4
VPS4B-205ENST00000591383 ARRB1P49407 418 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 SRP54P61011 504 aaKnown RBP6.32□□□□□ -1.4
VPS4B-205ENST00000591383 YPEL5P62699 121 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms