RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 GALNT3Q14435 633 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 SPA17Q15506 151 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 DNTTIP2Q5QJE6 756 aaKnown RBP16.91■□□□□ 0.3
RETREG3-210ENST00000590541 KLHL35Q6PF15 583 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 TMC3Q7Z5M5 1100 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 MARVELD3Q96A59 401 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 CD180Q99467 661 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 BARD1Q99728 777 aaKnown RBP16.91■□□□□ 0.3
RETREG3-210ENST00000590541 LATS2Q9NRM7 1088 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 C5AR2Q9P296 337 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 TMPRSS11EQ9UL52 423 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 SHOC2Q9UQ13 582 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 B3GNT3Q9Y2A9 372 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 HEY1Q9Y5J3 304 aa16.91■□□□□ 0.3
RETREG3-210ENST00000590541 A0A0A6YYK5 440 aaPredicted RBP16.9■□□□□ 0.3
RETREG3-210ENST00000590541 UBA6A0AVT1 1052 aaPredicted RBP16.9■□□□□ 0.3
RETREG3-210ENST00000590541 OR5K3A6NET4 321 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 PSTPIP1O43586 416 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 KRT1P04264 644 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 RORAP35398 523 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 CD86P42081 329 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 HALP42357 657 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 RRADP55042 308 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 CDK18Q07002 472 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 ATP1A4Q13733 1029 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 VWA5B1Q5TIE3 1220 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 FAM198BQ6UWH4 519 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 OR8K5Q8NH50 307 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 INPP5DQ92835 1189 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 MRFAP1L1Q96HT8 127 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 ADGRE3Q9BY15 652 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 NTNG1Q9Y2I2 539 aa16.9■□□□□ 0.3
RETREG3-210ENST00000590541 F5H423 210 aaPredicted RBP16.89■□□□□ 0.29
RETREG3-210ENST00000590541 HNRNPRO43390 633 aaKnown RBP16.89■□□□□ 0.29
RETREG3-210ENST00000590541 PIRTP0C851 137 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 BPIP17213 487 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 VCLP18206 1134 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 COMTP21964 271 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 GRNP28799 593 aaKnown RBP16.89■□□□□ 0.29
RETREG3-210ENST00000590541 AP1B1Q10567 949 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 ABRQ12979 859 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 ELOAQ14241 798 aaKnown RBP16.89■□□□□ 0.29
RETREG3-210ENST00000590541 SLC14A2Q15849 920 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 RPE65Q16518 533 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 RFX6Q8HWS3 928 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 TRAPPC5Q8IUR0 188 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 TTC30BQ8N4P2 665 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 SGSM3Q96HU1 749 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 OLFM3Q96PB7 478 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 PANX2Q96RD6 677 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 TRIB3Q96RU7 358 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 RAD18Q9NS91 495 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 PSMD13Q9UNM6 376 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 ENTPD4Q9Y227 616 aa16.89■□□□□ 0.29
RETREG3-210ENST00000590541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.89■□□□□ 0.29
RETREG3-210ENST00000590541 ARHGAP10A1A4S6 786 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 KCNK1O00180 336 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 ZBTB11O95625 1053 aaPredicted RBP16.88■□□□□ 0.29
RETREG3-210ENST00000590541 SLC4A1P02730 911 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 TMEM115Q12893 351 aaPredicted RBP16.88■□□□□ 0.29
RETREG3-210ENST00000590541 PLCL1Q15111 1095 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 FBXO38Q6PIJ6 1188 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 IGFL3Q6UXB1 125 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 FAM83HQ6ZRV2 1179 aaPredicted RBP16.88■□□□□ 0.29
RETREG3-210ENST00000590541 CPT1BQ92523 772 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 RNF25Q96BH1 459 aaPredicted RBP16.88■□□□□ 0.29
RETREG3-210ENST00000590541 MOCOSQ96EN8 888 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 PPM1MQ96MI6 270 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 VPS35Q96QK1 796 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 UNKQ9C0B0 810 aaKnown RBP16.88■□□□□ 0.29
RETREG3-210ENST00000590541 MAGEE1Q9HCI5 957 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 PCMTD2Q9NV79 361 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 HRASLS2Q9NWW9 162 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 BTRCQ9Y297 605 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 ZNF711Q9Y462 761 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 PCDHA13Q9Y5I0 950 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 ALG6Q9Y672 507 aa16.88■□□□□ 0.29
RETREG3-210ENST00000590541 COPG1Q9Y678 874 aaKnown RBP16.88■□□□□ 0.29
RETREG3-210ENST00000590541 DDX3YO15523 660 aaKnown RBP16.87■□□□□ 0.29
RETREG3-210ENST00000590541 IPO7O95373 1038 aaKnown RBP16.87■□□□□ 0.29
RETREG3-210ENST00000590541 CA5AP35218 305 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 CDKN2BP42772 138 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 DMPKQ09013 629 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 TAZQ16635 292 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 KYNUQ16719 465 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 ATP13A5Q4VNC0 1218 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 ZNF789Q5FWF6 425 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 FAM182AQ5T1J6 154 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 TMTC4Q5T4D3 741 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 C11orf63Q6NUN7 778 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 NT5DC3Q86UY8 548 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 TMTC1Q8IUR5 882 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 SYTL1Q8IYJ3 562 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 RCOR2Q8IZ40 523 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 CNTD1Q8N815 330 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 UBE2Q2Q8WVN8 375 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 CLIP3Q96DZ5 547 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 SRPK1Q96SB4 655 aaKnown RBP16.87■□□□□ 0.29
RETREG3-210ENST00000590541 TLR10Q9BXR5 811 aa16.87■□□□□ 0.29
RETREG3-210ENST00000590541 C2CD3Q4AC94 2353 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms