RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ANKS6Q68DC2 871 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 DUS1LQ6P1R4 473 aaKnown RBP11.81□□□□□ -0.52
TPM4-212ENST00000590180 KLHL35Q6PF15 583 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 AFTPHQ6ULP2 937 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 CCDC81Q6ZN84 652 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 FAM92BQ6ZTR7 304 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 RASGEF1CQ8N431 466 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 PHC3Q8NDX5 983 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 OR13J1Q8NGT2 312 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 GPR150Q8NGU9 434 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 HM13Q8TCT9 377 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 RSC1A1Q92681 617 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 C9orf72Q96LT7 481 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 ZNF778Q96MU6 729 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 FERD3LQ96RJ6 166 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 CCNL2Q96S94 520 aaPredicted RBP11.81□□□□□ -0.52
TPM4-212ENST00000590180 CTRCQ99895 268 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 ASPSCR1Q9BZE9 553 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 B3GNT4Q9C0J1 378 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 COG4Q9H9E3 785 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 EIF2B3Q9NR50 452 aaKnown RBP11.81□□□□□ -0.52
TPM4-212ENST00000590180 ANAPC5Q9UJX4 755 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 RIMKLBQ9ULI2 386 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 TCAF1Q9Y4C2 921 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 B3GALT1Q9Y5Z6 326 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 PRSS21Q9Y6M0 314 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 CELSR3Q9NYQ7 3312 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 IFRD1O00458 451 aaPredicted RBP11.8□□□□□ -0.52
TPM4-212ENST00000590180 KIF1CO43896 1103 aaKnown RBP11.8□□□□□ -0.52
TPM4-212ENST00000590180 LIPCP11150 499 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 CD82P27701 267 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 FOXN2P32314 431 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 PPARGP37231 505 aaPredicted RBP11.8□□□□□ -0.52
TPM4-212ENST00000590180 COILP38432 576 aaPredicted RBP11.8□□□□□ -0.52
TPM4-212ENST00000590180 CRADDP78560 199 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 SARNPP82979 210 aaKnown RBP11.8□□□□□ -0.52
TPM4-212ENST00000590180 MC2RQ01718 297 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 FOXM1Q08050 763 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 VAC14Q08AM6 782 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 BRD3Q15059 726 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 MANEAQ5SRI9 462 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 CAPRIN2Q6IMN6 1127 aaKnown RBP11.8□□□□□ -0.52
TPM4-212ENST00000590180 ARMC6Q6NXE6 501 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 TTC27Q6P3X3 843 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 LRRC8BQ6P9F7 803 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 CERS6Q6ZMG9 384 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 COG1Q8WTW3 980 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 ZFPM2Q8WW38 1151 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 ELMO1Q92556 727 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 PMEPA1Q969W9 287 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 RMDN2Q96LZ7 410 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 OSBPL9Q96SU4 736 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 HRASLS2Q9NWW9 162 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 ACSL6Q9UKU0 697 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 PCDHGA3Q9Y5H0 932 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 HEBP2Q9Y5Z4 205 aa11.8□□□□□ -0.52
TPM4-212ENST00000590180 LAMA5O15230 3695 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 GOLGA6L10A0A0M3HER8 536 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 TCRBV7S3A2A0A539 114 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 OR6C74A6NCV1 312 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 F8W8V4 182 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 STMND1H3BQB6 276 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 PGRMC1O00264 195 aaKnown RBP11.79□□□□□ -0.52
TPM4-212ENST00000590180 POLR1CO15160 346 aaPredicted RBP11.79□□□□□ -0.52
TPM4-212ENST00000590180 ZNF185O15231 689 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 OR1I1O60431 355 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 C9P02748 559 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 FTH1P02794 183 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 OR56A5P0C7T3 313 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 ITGB6P18564 788 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 TPSB2P20231 275 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 MGAT1P26572 445 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 NDUFS1P28331 727 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 PDHA2P29803 388 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 CAPZBP47756 277 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 PREPP48147 710 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 RAB15P59190 212 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 CDK16Q00536 496 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 TPSAB1Q15661 275 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 CCDC137Q6PK04 289 aaKnown RBP11.79□□□□□ -0.52
TPM4-212ENST00000590180 CES3Q6UWW8 571 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 CEACAM20Q6UY09 585 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 NAPRTQ6XQN6 538 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 LDB1Q86U70 411 aaPredicted RBP11.79□□□□□ -0.52
TPM4-212ENST00000590180 OR4E2Q8NGC2 313 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 DDA1Q9BW61 102 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 IL22Q9GZX6 179 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 FBXO8Q9NRD0 319 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 CATSPERZQ9NTU4 200 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 EPHA6Q9UF33 1036 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 SLC24A2Q9UI40 661 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 SNX12Q9UMY4 172 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 MN1Q10571 1320 aaPredicted RBP11.79□□□□□ -0.52
TPM4-212ENST00000590180 CFAP47Q6ZTR5 3102 aa11.79□□□□□ -0.52
TPM4-212ENST00000590180 WDFY3Q8IZQ1 3526 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 UBA6A0AVT1 1052 aaPredicted RBP11.78□□□□□ -0.52
TPM4-212ENST00000590180 EIF4E1BA6NMX2 242 aaKnown RBP11.78□□□□□ -0.52
TPM4-212ENST00000590180 QSOX1O00391 747 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 TOX3O15405 576 aaPredicted RBP11.78□□□□□ -0.52
TPM4-212ENST00000590180 CD3EAPO15446 510 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms