RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 BCL7AQ4VC05 210 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 ITPRIPL1Q6GPH6 555 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 CAPRIN2Q6IMN6 1127 aaKnown RBP17.58■□□□□ 0.4
H3F3B-209ENST00000589949 DARS2Q6PI48 645 aaKnown RBP17.58■□□□□ 0.4
H3F3B-209ENST00000589949 PPP1R3BQ86XI6 285 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 ACRBPQ8NEB7 543 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 C9orf43Q8TAL5 461 aaPredicted RBP17.58■□□□□ 0.4
H3F3B-209ENST00000589949 CT55Q8WUE5 264 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 APOBEC4Q8WW27 367 aaKnown RBP17.58■□□□□ 0.4
H3F3B-209ENST00000589949 UBXN4Q92575 508 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 STAMBPL1Q96FJ0 436 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 C12orf66Q96MD2 445 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 SPATA13Q96N96 652 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 SLC24A2Q9UI40 661 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 C2orf81A6NN90 581 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 LDB2O43679 373 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 NTRK1P04629 796 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 POLBP06746 335 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 PRSS56P0CW18 603 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 NR1D1P20393 614 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 PLCL1Q15111 1095 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 FAM199XQ6PEV8 388 aaPredicted RBP17.57■□□□□ 0.4
H3F3B-209ENST00000589949 CDKL3Q8IVW4 592 aaPredicted RBP17.57■□□□□ 0.4
H3F3B-209ENST00000589949 SIDT2Q8NBJ9 832 aaKnown RBP17.57■□□□□ 0.4
H3F3B-209ENST00000589949 ZNF514Q96K75 400 aaPredicted RBP17.57■□□□□ 0.4
H3F3B-209ENST00000589949 LINC00615Q96LM1 132 aaPredicted RBP17.57■□□□□ 0.4
H3F3B-209ENST00000589949 RBSNQ9H1K0 784 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 LHX9Q9NQ69 397 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 HRASLS2Q9NWW9 162 aa17.57■□□□□ 0.4
H3F3B-209ENST00000589949 OR6C74A6NCV1 312 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 BTNL10A8MVZ5 291 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 DDX3YO15523 660 aaKnown RBP17.56■□□□□ 0.4
H3F3B-209ENST00000589949 KATNA1O75449 491 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 KPNA2P52292 529 aaKnown RBP17.56■□□□□ 0.4
H3F3B-209ENST00000589949 RWDD2BP57060 319 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 MC1RQ01726 317 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 GPR19Q15760 415 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 KCTD11Q693B1 232 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 CFAP206Q8IYR0 622 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 NXPE1Q8N323 547 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 TBL1YQ9BQ87 522 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 KIR3DX1Q9H7L2 352 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 ARNT2Q9HBZ2 717 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 FGF21Q9NSA1 209 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 RARRES3Q9UL19 164 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 ACSL5Q9ULC5 683 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 PADI1Q9ULC6 663 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 R3HDM2Q9Y2K5 976 aaKnown RBP17.56■□□□□ 0.4
H3F3B-209ENST00000589949 AAR2Q9Y312 384 aaKnown RBP17.56■□□□□ 0.4
H3F3B-209ENST00000589949 PCDHGA6Q9Y5G7 932 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 FLNCQ14315 2725 aa17.56■□□□□ 0.4
H3F3B-209ENST00000589949 TCRBV7S2A1N4TA0A589 114 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 CCDC66A2RUB6 948 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 TLCD2A6NGC4 264 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 METTL18O95568 372 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 TPH1P17752 444 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 PRLHRP49683 370 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 DNASE1L3Q13609 305 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 LAMB3Q13751 1172 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 IGFBP7Q16270 282 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 DNTTIP2Q5QJE6 756 aaKnown RBP17.55■□□□□ 0.4
H3F3B-209ENST00000589949 PRAMEF17Q5VTA0 474 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 KLHL35Q6PF15 583 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 TMTC1Q8IUR5 882 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 D2HGDHQ8N465 521 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 SLC38A9Q8NBW4 561 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 MRFAP1L1Q96HT8 127 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 DNAJC1Q96KC8 554 aaKnown RBP17.55■□□□□ 0.4
H3F3B-209ENST00000589949 PDE7BQ9NP56 450 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 CRLS1Q9UJA2 301 aa17.55■□□□□ 0.4
H3F3B-209ENST00000589949 PACSIN2Q9UNF0 486 aaPredicted RBP17.55■□□□□ 0.4
H3F3B-209ENST00000589949 IGLV3-16A0A075B6K0 115 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 TRBV5-4A0A0C4DH59 114 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 CREG1O75629 220 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 CRTAMO95727 393 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 SLC35G4P0C7Q5 338 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 POLR2CP19387 275 aaPredicted RBP17.54■□□□□ 0.4
H3F3B-209ENST00000589949 GDF10P55107 478 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 NAP1L1P55209 391 aaKnown RBP17.54■□□□□ 0.4
H3F3B-209ENST00000589949 RPS18P62269 152 aaKnown RBP17.54■□□□□ 0.4
H3F3B-209ENST00000589949 HSD11B2P80365 405 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 PRPSAP1Q14558 356 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 TMEM139Q8IV31 216 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 FAM71DQ8N9W8 422 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 OR4E2Q8NGC2 313 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 CD180Q99467 661 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 OR52A5Q9H2C5 316 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 ACTL8Q9H568 366 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 LUC7LQ9NQ29 371 aaKnown RBP17.54■□□□□ 0.4
H3F3B-209ENST00000589949 PIH1D1Q9NWS0 290 aaKnown RBP17.54■□□□□ 0.4
H3F3B-209ENST00000589949 TP53TG5Q9Y2B4 290 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 RELNP78509 3460 aa17.54■□□□□ 0.4
H3F3B-209ENST00000589949 UBA6A0AVT1 1052 aaPredicted RBP17.53■□□□□ 0.4
H3F3B-209ENST00000589949 PIPSLA2A3N6 862 aa17.53■□□□□ 0.4
H3F3B-209ENST00000589949 CDC14CA4D256 554 aa17.53■□□□□ 0.4
H3F3B-209ENST00000589949 ARHGAP6O43182 974 aa17.53■□□□□ 0.4
H3F3B-209ENST00000589949 TJP3O95049 919 aa17.53■□□□□ 0.4
H3F3B-209ENST00000589949 PDGFAP04085 211 aa17.53■□□□□ 0.4
H3F3B-209ENST00000589949 CCNYL3P0C7X3 344 aa17.53■□□□□ 0.4
H3F3B-209ENST00000589949 ATP1B2P14415 290 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms