RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 COL27A1Q8IZC6 1860 aaPredicted RBP16.53■□□□□ 0.24
H3F3B-208ENST00000589599 PRAMEF33A0A0G2JMD5 474 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 MAGEB16A2A368 324 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 IFRD1O00458 451 aaPredicted RBP16.53■□□□□ 0.24
H3F3B-208ENST00000589599 CD3EAPO15446 510 aaKnown RBP16.53■□□□□ 0.24
H3F3B-208ENST00000589599 MLNP12872 115 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 ITIH1P19827 911 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 NDUFS1P28331 727 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 ABCG1P45844 678 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 TTPAP49638 278 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 PLCL1Q15111 1095 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 BROXQ5VW32 411 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 CAPRIN2Q6IMN6 1127 aaKnown RBP16.53■□□□□ 0.24
H3F3B-208ENST00000589599 CASC4Q6P4E1 433 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 MICALCLQ6ZW33 695 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 ZNF534Q76KX8 674 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 MCUQ8NE86 351 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 CPT1BQ92523 772 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 USP7Q93009 1102 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 ZDHHC12Q96GR4 267 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 TAAR9Q96RI9 348 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 TSSK1BQ9BXA7 367 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 SYBUQ9NX95 663 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.53■□□□□ 0.24
H3F3B-208ENST00000589599 SAMD15Q9P1V8 674 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 KLHL3Q9UH77 587 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 NEU2Q9Y3R4 380 aa16.53■□□□□ 0.24
H3F3B-208ENST00000589599 CFAP20Q9Y6A4 193 aaKnown RBP16.53■□□□□ 0.24
H3F3B-208ENST00000589599 ZNF106Q9H2Y7 1883 aaKnown RBP16.52■□□□□ 0.24
H3F3B-208ENST00000589599 ZFC3H1O60293 1989 aaKnown RBP16.52■□□□□ 0.24
H3F3B-208ENST00000589599 SDR42E2A6NKP2 422 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 CAPN5O15484 640 aaPredicted RBP16.52■□□□□ 0.24
H3F3B-208ENST00000589599 CCL4P13236 92 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 NMBRP28336 390 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 ETV5P41161 510 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 PAFAH1B1P43034 410 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 CD151P48509 253 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 KCTD19Q17RG1 926 aaPredicted RBP16.52■□□□□ 0.24
H3F3B-208ENST00000589599 ARHGAP22Q7Z5H3 698 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 SDCCAG8Q86SQ7 713 aaPredicted RBP16.52■□□□□ 0.24
H3F3B-208ENST00000589599 FAM129CQ86XR2 697 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 OTUD6BQ8N6M0 293 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.24
H3F3B-208ENST00000589599 GPR150Q8NGU9 434 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 ELMO1Q92556 727 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 CAPZA3Q96KX2 299 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 C9orf72Q96LT7 481 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 RMDN2Q96LZ7 410 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 RUNDC3BQ96NL0 473 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 TGM7Q96PF1 710 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 TREX1Q9NSU2 369 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 SLC39A1Q9NY26 324 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 OGFRQ9NZT2 677 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 SOX13Q9UN79 622 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 PRSS21Q9Y6M0 314 aa16.52■□□□□ 0.24
H3F3B-208ENST00000589599 MN1Q10571 1320 aaPredicted RBP16.51■□□□□ 0.23
H3F3B-208ENST00000589599 EFCAB7A8K855 629 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 B4E171 279 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 LIN7AO14910 233 aaPredicted RBP16.51■□□□□ 0.23
H3F3B-208ENST00000589599 PFDN6O15212 129 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 TOX3O15405 576 aaPredicted RBP16.51■□□□□ 0.23
H3F3B-208ENST00000589599 KLK10O43240 276 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 OR1I1O60431 355 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 AVILO75366 819 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 NDUFS3O75489 264 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 C9P02748 559 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 FGF3P11487 239 aaPredicted RBP16.51■□□□□ 0.23
H3F3B-208ENST00000589599 PAMP19021 973 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 ITPKBP27987 946 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 TSPAN7P41732 249 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 CAPZBP47756 277 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 PLOD1Q02809 727 aaPredicted RBP16.51■□□□□ 0.23
H3F3B-208ENST00000589599 COL28A1Q2UY09 1125 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 SYTL3Q4VX76 610 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 ANKRD22Q5VYY1 191 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 MRNIPQ6NTE8 343 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 CAND1Q86VP6 1230 aaKnown RBP16.51■□□□□ 0.23
H3F3B-208ENST00000589599 SPACA3Q8IXA5 215 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 MPP5Q8N3R9 675 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 LILRA3Q8N6C8 439 aaPredicted RBP16.51■□□□□ 0.23
H3F3B-208ENST00000589599 FERD3LQ96RJ6 166 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 ASPSCR1Q9BZE9 553 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 RAB33BQ9H082 229 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 DDX47Q9H0S4 455 aaKnown RBP16.51■□□□□ 0.23
H3F3B-208ENST00000589599 RNF14Q9UBS8 474 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 EPHA6Q9UF33 1036 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 ASIC3Q9UHC3 531 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 LHX6Q9UPM6 363 aa16.51■□□□□ 0.23
H3F3B-208ENST00000589599 GOLGA8MH3BSY2 632 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 PRAMEF10O60809 474 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 RASSF9O75901 435 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 VAPBO95292 243 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 ANKRD34CP0C6C1 535 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 CD82P27701 267 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 PREPP48147 710 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 UCNP55089 124 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 GFERP55789 205 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 RAB15P59190 212 aa16.5■□□□□ 0.23
H3F3B-208ENST00000589599 ZNF658BQ4V348 819 aaPredicted RBP16.5■□□□□ 0.23
H3F3B-208ENST00000589599 DCAF12Q5T6F0 453 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms