RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TMEM200AQ86VY9 491 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 ZNF354CQ86Y25 554 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 MCOLN2Q8IZK6 566 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 SYCE1Q8N0S2 351 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 RTL3Q8N8U3 475 aaKnown RBP5.94□□□□□ -1.46
VPS25-204ENST00000589577 WFDC11Q8NEX6 87 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 SLC30A5Q8TAD4 765 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 COG1Q8WTW3 980 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 UBXN4Q92575 508 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 TBC1D31Q96DN5 1066 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 ZDHHC12Q96GR4 267 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 GBP5Q96PP8 586 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 SMIM14Q96QK8 99 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 ISCUQ9H1K1 167 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 ABCG8Q9H221 673 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 RETREG1Q9H6L5 497 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 SLC40A1Q9NP59 571 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 NPDC1Q9NQX5 325 aaPredicted RBP5.94□□□□□ -1.46
VPS25-204ENST00000589577 KCND1Q9NSA2 647 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 VPS18Q9P253 973 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 MYO1AQ9UBC5 1043 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 UBA2Q9UBT2 640 aaPredicted RBP5.94□□□□□ -1.46
VPS25-204ENST00000589577 CNOT6Q9ULM6 557 aaKnown RBP5.94□□□□□ -1.46
VPS25-204ENST00000589577 PCDHA13Q9Y5I0 950 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 ADGRG1Q9Y653 693 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 HIVEP2P31629 2446 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 A0A0A6YYK5 440 aaPredicted RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 FAM170AA1A519 330 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 TTC24A2A3L6 582 aaPredicted RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 OR5K4A6NMS3 321 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 OR52A4PA6NMU1 304 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 KIF2AO00139 706 aaPredicted RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 PSMD11O00231 422 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 HTRA2O43464 458 aaPredicted RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 LDB2O43679 373 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 SPOPO43791 374 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 KLHL41O60662 606 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 SLC19A2O60779 497 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 PRAMEF11O60813 436 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 VIPP01282 170 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 UMODP07911 640 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 UNGP13051 313 aaPredicted RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 CHRNB2P17787 502 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 DEKP35659 375 aaKnown RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 SSR1P43307 286 aaKnown RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 GABRB2P47870 512 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 ARCN1P48444 511 aaKnown RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 SMSP52788 366 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 POLR2LP62875 67 aaKnown RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 HSD11B2P80365 405 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 CCZ1BP86790 482 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 CCZ1P86791 482 aaPredicted RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 FOLH1Q04609 750 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 HADHQ16836 314 aaKnown RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 RAD9BQ6WBX8 426 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 KMT5CQ86Y97 462 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 KRTAP1-3Q8IUG1 177 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 PHC2Q8IXK0 858 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 PYROXD2Q8N2H3 581 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 CCDC185Q8N715 623 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 AVL9Q8NBF6 648 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 ACRBPQ8NEB7 543 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 CPT1BQ92523 772 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 AP2M1Q96CW1 435 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 CLIP3Q96DZ5 547 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 C18orf12Q96KH6 178 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 PPM1MQ96MI6 270 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 IP6K3Q96PC2 410 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 MCEEQ96PE7 176 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 MCCC1Q96RQ3 725 aaPredicted RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 PCDHB18PQ96TA0 734 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 DESI2Q9BSY9 194 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 NUP85Q9BW27 656 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 METTL5Q9NRN9 209 aaKnown RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 ZNF358Q9NW07 568 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 KCTD5Q9NXV2 234 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 SLC23A2Q9UGH3 650 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 IP6K2Q9UHH9 426 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 ST6GALNAC2Q9UJ37 374 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 ANAPC7Q9UJX3 599 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 TMEM59LQ9UK28 342 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 GUCA1BQ9UMX6 200 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 PPP2R2CQ9Y2T4 447 aa5.93□□□□□ -1.46
VPS25-204ENST00000589577 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS25-204ENST00000589577 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS25-204ENST00000589577 SONP18583 2426 aaKnown RBP5.93□□□□□ -1.46
VPS25-204ENST00000589577 MACROD2A1Z1Q3 448 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 TLCD2A6NGC4 264 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 SIGLEC16A6NMB1 481 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 FADS2P1A8MWK0 482 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 SLCO2B1O94956 709 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 ASMTLO95671 621 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 LY6G6DO95868 133 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 CPP00450 1065 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 CYP1A2P05177 515 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 INHBBP09529 407 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 GPD1P21695 349 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 PSMA2P25787 234 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 PCSK6P29122 969 aa5.92□□□□□ -1.46
VPS25-204ENST00000589577 HADHAP40939 763 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms