RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 ZNF7P17097 686 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-208ENST00000588667 ARNTP27540 789 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 SERPINB9P50453 376 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 CLCNKAP51800 687 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 PPP2R2AP63151 447 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 PLA2G4EQ3MJ16 856 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 BCL7AQ4VC05 210 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 FASTKD1Q53R41 847 aaKnown RBP19.8■□□□□ 0.76
ATG4D-208ENST00000588667 AARS2Q5JTZ9 985 aaKnown RBP19.8■□□□□ 0.76
ATG4D-208ENST00000588667 OGFOD3Q6PK18 319 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 TMEM220Q6QAJ8 160 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 DET1Q7L5Y6 550 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 EXOC3L1Q86VI1 746 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 KCNMB4Q86W47 210 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 UNC5BQ8IZJ1 945 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 GPR156Q8NFN8 814 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 CCDC97Q96F63 343 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-208ENST00000588667 CATSPERZQ9NTU4 200 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 TXNDC16Q9P2K2 825 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 PCDHGA1Q9Y5H4 931 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 DNMT3AQ9Y6K1 912 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-208ENST00000588667 KRT38O76015 456 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 ERVK-10P10266 1014 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 ATP1B2P14415 290 aaPredicted RBP19.8■□□□□ 0.76
ATG4D-208ENST00000588667 VCLP18206 1134 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 PACS1Q6VY07 963 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 ZDHHC1Q8WTX9 485 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 SGF29Q96ES7 293 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 CNOT10Q9H9A5 744 aaKnown RBP19.8■□□□□ 0.76
ATG4D-208ENST00000588667 KLC4Q9NSK0 619 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 GULP1Q9UBP9 304 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 SLC23A2Q9UGH3 650 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 KNTC1P50748 2209 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 NOBOXO60393 691 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 KCNJ13O60928 360 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 DKK1O94907 266 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 VAPBO95292 243 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 CNTFP26441 200 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 PPARGP37231 505 aaPredicted RBP19.79■□□□□ 0.76
ATG4D-208ENST00000588667 NSG1P42857 185 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 PRLHRP49683 370 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 GYS2P54840 703 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 ILKQ13418 452 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 TRABD2AQ86V40 505 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 AMZ2Q86W34 360 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 SRRM1Q8IYB3 904 aaKnown RBP19.79■□□□□ 0.76
ATG4D-208ENST00000588667 NAT6Q93015 286 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 NSMCE4AQ9NXX6 385 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 ADAM21Q9UKJ8 722 aa19.79■□□□□ 0.76
ATG4D-208ENST00000588667 NCOR2Q9Y618 2525 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 EME2A4GXA9 379 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-208ENST00000588667 KLHL33A6NCF5 533 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 PRR19A6NJB7 356 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 CD3EAPO15446 510 aaKnown RBP19.78■□□□□ 0.76
ATG4D-208ENST00000588667 SGTAO43765 313 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 RFPL3O75679 317 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 MYF5P13349 255 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 ARCN1P48444 511 aaKnown RBP19.78■□□□□ 0.76
ATG4D-208ENST00000588667 DMPKQ09013 629 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 C14orf28Q4W4Y0 310 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 SLCO6A1Q86UG4 719 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 GABPB2Q8TAK5 448 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-208ENST00000588667 MTBPQ96DY7 904 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 LINC00615Q96LM1 132 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-208ENST00000588667 CPNE1Q99829 537 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 OSGEPL1Q9H4B0 414 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 MARCH4Q9P2E8 410 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-208ENST00000588667 TBC1D29Q9UFV1 150 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 PADI4Q9UM07 663 aa19.78■□□□□ 0.76
ATG4D-208ENST00000588667 A6NCN8 305 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 POP7O75817 140 aaKnown RBP19.77■□□□□ 0.76
ATG4D-208ENST00000588667 AP2A2O94973 939 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 GP1BAP07359 652 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 SNRPAP09012 282 aaKnown RBP19.77■□□□□ 0.76
ATG4D-208ENST00000588667 TTPAP49638 278 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 SEMA3AQ14563 771 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 HSP90AA5PQ58FG0 334 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 N4BP2L1Q5TBK1 243 aaPredicted RBP19.77■□□□□ 0.76
ATG4D-208ENST00000588667 GUSBP11Q6P575 273 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 ERMP1Q7Z2K6 904 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 C17orf82Q86X59 251 aaPredicted RBP19.77■□□□□ 0.76
ATG4D-208ENST00000588667 SFTPA2Q8IWL1 248 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 NAGSQ8N159 534 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 BEND7Q8N7W2 519 aaPredicted RBP19.77■□□□□ 0.76
ATG4D-208ENST00000588667 OR6C4Q8NGE1 309 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 NAT14Q8WUY8 206 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 SMC6Q96SB8 1091 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 IL1RAPL1Q9NZN1 696 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 DNAJC16Q9Y2G8 782 aa19.77■□□□□ 0.76
ATG4D-208ENST00000588667 QSOX1O00391 747 aa19.76■□□□□ 0.75
ATG4D-208ENST00000588667 FAM155BO75949 473 aa19.76■□□□□ 0.75
ATG4D-208ENST00000588667 CDK4P11802 303 aa19.76■□□□□ 0.75
ATG4D-208ENST00000588667 SLC2A4P14672 509 aa19.76■□□□□ 0.75
ATG4D-208ENST00000588667 GP5P40197 560 aa19.76■□□□□ 0.75
ATG4D-208ENST00000588667 ATP1A2P50993 1020 aa19.76■□□□□ 0.75
ATG4D-208ENST00000588667 THOC5Q13769 683 aaKnown RBP19.76■□□□□ 0.75
ATG4D-208ENST00000588667 TEDDM1Q5T9Z0 273 aa19.76■□□□□ 0.75
ATG4D-208ENST00000588667 MRNIPQ6NTE8 343 aa19.76■□□□□ 0.75
ATG4D-208ENST00000588667 IFI44Q8TCB0 444 aa19.76■□□□□ 0.75
ATG4D-208ENST00000588667 SELENOSQ9BQE4 189 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms