RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 SGSM3Q96HU1 749 aa18.79■□□□□ 0.6
CIRBP-217ENST00000588230 C12orf66Q96MD2 445 aa18.79■□□□□ 0.6
CIRBP-217ENST00000588230 INSM2Q96T92 566 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-217ENST00000588230 KIFC1Q9BW19 673 aa18.79■□□□□ 0.6
CIRBP-217ENST00000588230 MRM3Q9HC36 420 aaKnown RBP18.79■□□□□ 0.6
CIRBP-217ENST00000588230 XAB2Q9HCS7 855 aaKnown RBP18.79■□□□□ 0.6
CIRBP-217ENST00000588230 KCND1Q9NSA2 647 aa18.79■□□□□ 0.6
CIRBP-217ENST00000588230 TREX1Q9NSU2 369 aa18.79■□□□□ 0.6
CIRBP-217ENST00000588230 CATSPERZQ9NTU4 200 aa18.79■□□□□ 0.6
CIRBP-217ENST00000588230 TMEM9Q9P0T7 183 aa18.79■□□□□ 0.6
CIRBP-217ENST00000588230 PISDQ9UG56 409 aa18.79■□□□□ 0.6
CIRBP-217ENST00000588230 SSUH2Q9Y2M2 353 aa18.79■□□□□ 0.6
CIRBP-217ENST00000588230 F8W8V4 182 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 GOLGA8MH3BSY2 632 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 HGSO14964 777 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-217ENST00000588230 AVILO75366 819 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 TMEM63AO94886 807 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 UBXN7O94888 489 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 ITGA2BP08514 1039 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 GSTM1P09488 218 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 THRAP10827 490 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 MTHFD1P11586 935 aaKnown RBP18.78■□□□□ 0.6
CIRBP-217ENST00000588230 MLNP12872 115 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 TYRP1P17643 537 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 PAFAH1B1P43034 410 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 GSTM4Q03013 218 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 AARS2Q5JTZ9 985 aaKnown RBP18.78■□□□□ 0.6
CIRBP-217ENST00000588230 CASC4Q6P4E1 433 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 LRRC69Q6ZNQ3 347 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 CAND1Q86VP6 1230 aaKnown RBP18.78■□□□□ 0.6
CIRBP-217ENST00000588230 JAMLQ86YT9 394 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 PLXDC1Q8IUK5 500 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 C17orf53Q8N3J3 647 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-217ENST00000588230 LILRA3Q8N6C8 439 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-217ENST00000588230 MCUQ8NE86 351 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 COG4Q9H9E3 785 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 ASIC3Q9UHC3 531 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 PCYOX1Q9UHG3 505 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 SOX13Q9UN79 622 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 CFAP20Q9Y6A4 193 aaKnown RBP18.78■□□□□ 0.6
CIRBP-217ENST00000588230 PRSS21Q9Y6M0 314 aa18.78■□□□□ 0.6
CIRBP-217ENST00000588230 ATMQ13315 3056 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 A8MU76 341 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 CD3EAPO15446 510 aaKnown RBP18.77■□□□□ 0.6
CIRBP-217ENST00000588230 FTH1P02794 183 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 OR56A5P0C7T3 313 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 CSTF2P33240 577 aaKnown RBP eCLIP18.77■□□□□ 0.6
CIRBP-217ENST00000588230 KRT33BQ14525 404 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 ARMC3Q5W041 872 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 CES3Q6UWW8 571 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 KLHL7Q8IXQ5 586 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 OTUD6BQ8N6M0 293 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 AGBL5Q8NDL9 886 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 SPDYE1Q8NFV5 336 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-217ENST00000588230 GPR150Q8NGU9 434 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 MFSD3Q96ES6 412 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 NAF1Q96HR8 494 aaKnown RBP18.77■□□□□ 0.6
CIRBP-217ENST00000588230 RMDN2Q96LZ7 410 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 RUNDC3BQ96NL0 473 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 BBC3Q96PG8 261 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-217ENST00000588230 SAMD15Q9P1V8 674 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 PDP2Q9P2J9 529 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 RNF14Q9UBS8 474 aa18.77■□□□□ 0.6
CIRBP-217ENST00000588230 SDR42E2A6NKP2 422 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 OR1I1O60431 355 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 VAPBO95292 243 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 ITIH1P19827 911 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 TTPAP49638 278 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 MAPK10P53779 464 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 RPA4Q13156 261 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 SEMA3AQ14563 771 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 PLCL1Q15111 1095 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 SOWAHCQ53LP3 525 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-217ENST00000588230 CAPRIN2Q6IMN6 1127 aaKnown RBP18.76■□□□□ 0.59
CIRBP-217ENST00000588230 XKR5Q6UX68 686 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 LDB1Q86U70 411 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-217ENST00000588230 PPIL6Q8IXY8 311 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 MPP5Q8N3R9 675 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 NAT8LQ8N9F0 302 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 SLCO2A1Q92959 643 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 OGFRQ9NZT2 677 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 MARCH4Q9P2E8 410 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-217ENST00000588230 KLHL3Q9UH77 587 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 HEBP2Q9Y5Z4 205 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 COLEC10Q9Y6Z7 277 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 ATRXP46100 2492 aa18.76■□□□□ 0.59
CIRBP-217ENST00000588230 MAGEB16A2A368 324 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 IFRD1O00458 451 aaPredicted RBP18.75■□□□□ 0.59
CIRBP-217ENST00000588230 KALRNO60229 2985 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 PAMP19021 973 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 PTGIRP43119 386 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 PREPP48147 710 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 PTK6Q13882 451 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 DUS1LQ6P1R4 473 aaKnown RBP18.75■□□□□ 0.59
CIRBP-217ENST00000588230 KLHL35Q6PF15 583 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 SDCCAG8Q86SQ7 713 aaPredicted RBP18.75■□□□□ 0.59
CIRBP-217ENST00000588230 ZFPM2Q8WW38 1151 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 KCNE4Q8WWG9 221 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 ELMO1Q92556 727 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 SERPINB12Q96P63 405 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms