RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 WWP1Q9H0M0 922 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 CHST8Q9H2A9 424 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 LATS2Q9NRM7 1088 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 SMOXQ9NWM0 555 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 IFNKQ9P0W0 207 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 SAE1Q9UBE0 346 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-213ENST00000587604 SLC24A2Q9UI40 661 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 BTRCQ9Y297 605 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 ZNF451Q9Y4E5 1061 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 PIKFYVEQ9Y2I7 2098 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 OR6C74A6NCV1 312 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 GOLGA6L19H0YKK7 550 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 MEN1O00255 615 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 GAPDHSO14556 408 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-213ENST00000587604 AKR1B10O60218 316 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 CEACAM4O75871 244 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 RAB40ALP0C0E4 278 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 HLA-DPA1P20036 260 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 MSH3P20585 1137 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 PBLDP30039 288 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-213ENST00000587604 CDKN2BP42772 138 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 SLC1A1P43005 524 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 TFDP2Q14188 446 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 TAZQ16635 292 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 PLEKHS1Q5SXH7 462 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 FNBP1LQ5T0N5 605 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 MFSD7Q6UXD7 560 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 PID1Q7Z2X4 250 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 ZNF398Q8TD17 642 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 SSC4DQ8WTU2 575 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 CPT1BQ92523 772 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 C12orf66Q96MD2 445 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 VAT1Q99536 393 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 DNAJC7Q99615 494 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 NLNQ9BYT8 704 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 KIR3DX1Q9H7L2 352 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-213ENST00000587604 COLEC10Q9Y6Z7 277 aa13.7□□□□□ -0.22
DNMT1-213ENST00000587604 DOPEY1Q5JWR5 2465 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 BUD23O43709 281 aaKnown RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 CST8O60676 142 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 PYGMP11217 842 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 AKT1P31749 480 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 PTGIRP43119 386 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 KPNA2P52292 529 aaKnown RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 MPP3Q13368 585 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 INPP5JQ15735 1006 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 HIST2H2BCQ6DN03 193 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 DUS1LQ6P1R4 473 aaKnown RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 DET1Q7L5Y6 550 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 HPS6Q86YV9 775 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 DSELQ8IZU8 1212 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 IPMKQ8NFU5 416 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 OR2L2Q8NH16 312 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 OXNAD1Q96HP4 312 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 LINC00615Q96LM1 132 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 FANCEQ9HB96 536 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 SYTL2Q9HCH5 934 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 ZNHIT6Q9NWK9 470 aaKnown RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 SOHLH2Q9NX45 425 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 KLHL8Q9P2G9 620 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 TCFL5Q9UL49 500 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 G3BP2Q9UN86 482 aaKnown RBP13.69□□□□□ -0.22
DNMT1-213ENST00000587604 SNX7Q9UNH6 387 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 CCDC88CQ9P219 2028 aa13.69□□□□□ -0.22
DNMT1-213ENST00000587604 ANKRD12Q6UB98 2062 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 SYCE3A1L190 88 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 MATN2O00339 956 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 STX7O15400 261 aaKnown RBP13.68□□□□□ -0.22
DNMT1-213ENST00000587604 DPM1O60762 260 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 SEMA7AO75326 666 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 TMEM63AO94886 807 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 PRAMEF1O95521 474 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 TPM3P06753 285 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 SLC35G4P0C7Q5 338 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 TNNT1P13805 278 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 PECAM1P16284 738 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-213ENST00000587604 POLR2CP19387 275 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-213ENST00000587604 VARSP26640 1264 aaKnown RBP13.68□□□□□ -0.22
DNMT1-213ENST00000587604 NDUFS1P28331 727 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 RORAP35398 523 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 PRKAA1Q13131 559 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 GSE1Q14687 1217 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 PTPRCAPQ14761 206 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 BCL7AQ4VC05 210 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 PRAMEF17Q5VTA0 474 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 LCN10Q6JVE6 187 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 JMJD6Q6NYC1 403 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-213ENST00000587604 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 ZC3H18Q86VM9 953 aaKnown RBP13.68□□□□□ -0.22
DNMT1-213ENST00000587604 ZNF567Q8N184 647 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 ENDOVQ8N8Q3 282 aaKnown RBP13.68□□□□□ -0.22
DNMT1-213ENST00000587604 TMEM102Q8N9M5 508 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-213ENST00000587604 FDCSPQ8NFU4 85 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 OR4E2Q8NGC2 313 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 P3H4Q92791 437 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 CLIP3Q96DZ5 547 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 PPM1MQ96MI6 270 aa13.68□□□□□ -0.22
DNMT1-213ENST00000587604 CCM2Q9BSQ5 444 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms