RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ZFC3H1O60293 1989 aaKnown RBP7.74□□□□□ -1.17
VMP1-204ENST00000587259 A8MX80 341 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 B4DGG1 531 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 C9orf172C9J069 976 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 COPEO14579 308 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 SUV39H1O43463 412 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 TM7SF2O76062 418 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 PEX11BO96011 259 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 JMJD7P0C870 316 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 CCL4P13236 92 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 CTSEP14091 401 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 SPRP35270 261 aaPredicted RBP7.74□□□□□ -1.17
VMP1-204ENST00000587259 ADRA1AP35348 466 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 CCT5P48643 541 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 SRP54P61011 504 aaKnown RBP7.74□□□□□ -1.17
VMP1-204ENST00000587259 PDE1BQ01064 536 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 NSUN2Q08J23 767 aaKnown RBP eCLIP7.74□□□□□ -1.17
VMP1-204ENST00000587259 PTK2BQ14289 1009 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 IGFBP7Q16270 282 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 AMZ1Q400G9 498 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 ANKRD20A4Q4UJ75 823 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 INO80DQ53TQ3 878 aaPredicted RBP7.74□□□□□ -1.17
VMP1-204ENST00000587259 UBAP2Q5T6F2 1119 aaKnown RBP7.74□□□□□ -1.17
VMP1-204ENST00000587259 PHF19Q5T6S3 580 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 HHATQ5VTY9 493 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 KIAA0930Q6ICG6 404 aaPredicted RBP7.74□□□□□ -1.17
VMP1-204ENST00000587259 RANBP10Q6VN20 620 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 ARHGAP36Q6ZRI8 547 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 KIAA0408Q6ZU52 694 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 CPLX4Q7Z7G2 160 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 TAX1BP1Q86VP1 789 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 KCNMB4Q86W47 210 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 ZSWIM9Q86XI8 627 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 LURAP1LQ8IV03 231 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 AGGF1Q8N302 714 aaeCLIP7.74□□□□□ -1.17
VMP1-204ENST00000587259 RCBTB1Q8NDN9 531 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 DENND6BQ8NEG7 585 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 FAM174AQ8TBP5 190 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 MZB1Q8WU39 189 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 LRRN4Q8WUT4 740 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 SREK1Q8WXA9 508 aaKnown RBP7.74□□□□□ -1.17
VMP1-204ENST00000587259 OR1E3Q8WZA6 343 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 GLMNQ92990 594 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 ZBTB9Q96C00 473 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 OXNAD1Q96HP4 312 aaPredicted RBP7.74□□□□□ -1.17
VMP1-204ENST00000587259 SRPK1Q96SB4 655 aaKnown RBP7.74□□□□□ -1.17
VMP1-204ENST00000587259 GORASP1Q9BQQ3 440 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 APOOQ9BUR5 198 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 FICDQ9BVA6 458 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 ADGRE3Q9BY15 652 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 LRRN3Q9H3W5 708 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 RDH14Q9HBH5 336 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 NT5MQ9NPB1 228 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 NCKIPSDQ9NZQ3 722 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 KLQ9UEF7 1012 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 MID2Q9UJV3 735 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 RIMKLBQ9ULI2 386 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 TCAF1Q9Y4C2 921 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 RNF215Q9Y6U7 377 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 FLNCQ14315 2725 aa7.74□□□□□ -1.17
VMP1-204ENST00000587259 RELNP78509 3460 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 LRRK1Q38SD2 2015 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 TTC24A2A3L6 582 aaPredicted RBP7.73□□□□□ -1.17
VMP1-204ENST00000587259 TMEM202A6NGA9 273 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 TRIM49D1C9J1S8 452 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 TYROBPO43914 113 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 GLRA3O75311 464 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 PMPCBO75439 489 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 RASGRP1O95267 797 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 POP4O95707 220 aaKnown RBP7.73□□□□□ -1.17
VMP1-204ENST00000587259 GSRP00390 522 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 C1QAP02745 245 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 GSTA1P08263 222 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 LIPCP11150 499 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 MPSTP25325 297 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 CCNFP41002 786 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 GRIA1P42261 906 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 RGRP47804 291 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 SERPINB8P50452 374 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 ARSDP51689 593 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 KPNA2P52292 529 aaKnown RBP7.73□□□□□ -1.17
VMP1-204ENST00000587259 MAZP56270 477 aaKnown RBP7.73□□□□□ -1.17
VMP1-204ENST00000587259 WNT3AP56704 352 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 RHOAP61586 193 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 AP1S1P61966 158 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 SNRPD1P62314 119 aaKnown RBP7.73□□□□□ -1.17
VMP1-204ENST00000587259 TLE1Q04724 770 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 SLC18A2Q05940 514 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 SLC20A2Q08357 652 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 SLC10A7Q0GE19 358 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 NFATC4Q14934 902 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 C16orf72Q14CZ0 275 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 EFTUD2Q15029 972 aaKnown RBP eCLIP7.73□□□□□ -1.17
VMP1-204ENST00000587259 LRRC14Q15048 493 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 PDK4Q16654 411 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 INSCQ1MX18 579 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 MANEAQ5SRI9 462 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 HIST2H2BCQ6DN03 193 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 KDELC1Q6UW63 502 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 PACS1Q6VY07 963 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms